RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ATP6V0CP27449 155 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 ERVS71-1P61550 626 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 PLPPR5Q32ZL2 321 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 SPANXN3Q5MJ09 141 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 FAM201AQ5SY85 155 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 SLC48A1Q6P1K1 146 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 ZNF322Q6U7Q0 402 aaPredicted RBP1.9□□□□□ -2.11
SMC4-224ENST00000494612 S100A7AQ86SG5 101 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 TMEM86BQ8N661 226 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 ZFAND2AQ8N6M9 145 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 OR1L8Q8NGR8 309 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 OR2T4Q8NH00 348 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 RAB2BQ8WUD1 216 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 SERPINI1Q99574 410 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 MGLLQ99685 303 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 GLTPQ9NZD2 209 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 OPTCQ9UBM4 332 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 PKIGQ9Y2B9 76 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 HSPE1-MOB4S4R3N1 261 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 RYR2Q92736 4967 aa1.9□□□□□ -2.11
SMC4-224ENST00000494612 NBEAL2Q6ZNJ1 2754 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ROS1P08922 2347 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 IGLV3-32A0A0A0MS00 114 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 A8MWP6 167 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 CHP2O43745 196 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 MRPL33O75394 65 aaKnown RBP1.89□□□□□ -2.11
SMC4-224ENST00000494612 OR5G3P0C626 314 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ESDP10768 282 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 CCL1P22362 96 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 FGF12P61328 243 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 HOXC5Q00444 222 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 IFITM2Q01629 132 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 GLO1Q04760 184 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ACOT6Q3I5F7 207 aaPredicted RBP1.89□□□□□ -2.11
SMC4-224ENST00000494612 C5orf46Q6UWT4 87 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 AMTNQ6UX39 209 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 COMMD6Q7Z4G1 85 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 MMGT1Q8N4V1 131 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 OR2D3Q8NGH3 330 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 OR4K13Q8NH42 304 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 STAG3L4Q8TBR4 150 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ZNF675Q8TD23 568 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ZHX1-C8orf76Q96EF9 292 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 GNPNAT1Q96EK6 184 aaPredicted RBP1.89□□□□□ -2.11
SMC4-224ENST00000494612 CPNE2Q96FN4 548 aaPredicted RBP1.89□□□□□ -2.11
SMC4-224ENST00000494612 PHB2Q99623 299 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 NKX6-2Q9C056 277 aaPredicted RBP1.89□□□□□ -2.11
SMC4-224ENST00000494612 TUBA4BQ9H853 241 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 POPDC3Q9HBV1 291 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ANAPC10Q9UM13 185 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 HHLA2Q9UM44 414 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 SNX12Q9UMY4 172 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 PRELID3BQ9Y3B1 194 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 MGAM2Q2M2H8 2515 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 ALPK2Q86TB3 2170 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 DSCAML1Q8TD84 2053 aa1.89□□□□□ -2.11
SMC4-224ENST00000494612 A0A087WUJ7 227 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 GNG14A0A1W2PPG7 69 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 CLPSL1A2RUU4 121 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 OR6C6A6NF89 314 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 OR4C45A6NMZ5 311 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 C17orf98A8MV24 154 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 M0R233 179 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 COX7A2LO14548 114 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 BANF1O75531 89 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 APOMO95445 188 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 FGF6P10767 208 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 TSPEAR-AS2P59090 65 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 PSME3P61289 254 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 VBP1P61758 197 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 ARF6P62330 175 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 EDDM3AQ14507 147 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 MRPL51Q4U2R6 128 aaKnown RBP1.88□□□□□ -2.11
SMC4-224ENST00000494612 HACD4Q5VWC8 232 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 C3orf33Q6P1S2 294 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 RASL11AQ6T310 242 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 OR6V1Q8N148 313 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 DEFB125Q8N687 156 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 DAND5Q8N907 189 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 OR10A6Q8NH74 314 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 LHFPL5Q8TAF8 219 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 POP5Q969H6 163 aaKnown RBP1.88□□□□□ -2.11
SMC4-224ENST00000494612 MAGOHBQ96A72 148 aaKnown RBP1.88□□□□□ -2.11
SMC4-224ENST00000494612 OR52E6Q96RD3 313 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 SIGMAR1Q99720 223 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 GPR84Q9NQS5 396 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 CMTM6Q9NX76 183 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 VPREB3Q9UKI3 123 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 RNF11Q9Y3C5 154 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 DNAH3Q8TD57 4116 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 HEATR1Q9H583 2144 aaKnown RBP1.88□□□□□ -2.11
SMC4-224ENST00000494612 ARFGEF3Q5TH69 2177 aa1.88□□□□□ -2.11
SMC4-224ENST00000494612 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 NOTCH1P46531 2555 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 IGHV1-69-2A0A0G2JMI3 117 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 LOC102725191A0A1B0GVB3 256 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 MDFIC2A0A1B0GVS7 189 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 A0A1W2PQD3 144 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms