RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-209	ENST00000494411	CHAC2	Q8WUX2	184 aa		13.85	□□□□□ -0.19
PCMT1-209	ENST00000494411	CLUHP3	Q96NS8	147 aa		13.85	□□□□□ -0.19
PCMT1-209	ENST00000494411	NPCDR1	Q9BY65	106 aa		13.85	□□□□□ -0.19
PCMT1-209	ENST00000494411	IGHV4-28	A0A0C4DH34	117 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	SNRPC	P09234	159 aa	Known RBP	13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	CXCL3	P19876	107 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	HLA-DMB	P28068	263 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	BPIFA4P	Q86YQ2	179 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	ZNF738	Q8NE65	137 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	PFDN5	Q99471	154 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	SLC35B3	Q9H1N7	401 aa		13.84	□□□□□ -0.19
PCMT1-209	ENST00000494411	LCE6A	A0A183	80 aa		13.83	□□□□□ -0.2
PCMT1-209	ENST00000494411	MIF	P14174	115 aa		13.83	□□□□□ -0.2
PCMT1-209	ENST00000494411	PSG9	Q00887	426 aa		13.83	□□□□□ -0.2
PCMT1-209	ENST00000494411	LRRC20	Q8TCA0	184 aa		13.83	□□□□□ -0.2
PCMT1-209	ENST00000494411	MBD2	Q9UBB5	411 aa		13.83	□□□□□ -0.2
PCMT1-209	ENST00000494411	TRAV5	A0A0B4J249	113 aa		13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411		H3BTX0	84 aa		13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	ZNF705D	P0CH99	300 aa	Predicted RBP	13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	ZNF705B	P0CI00	300 aa	Predicted RBP	13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	RBMY1A1	P0DJD3	496 aa	Known RBP	13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	RBMY1C	P0DJD4	496 aa		13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	NANOS2	P60321	138 aa	Known RBP	13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	RBMY1F	Q15415	496 aa	Known RBP	13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	LCN15	Q6UWW0	184 aa		13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	C11orf45	Q8TAV5	145 aa		13.82	□□□□□ -0.2
PCMT1-209	ENST00000494411	NUPR2	A6NF83	97 aa		13.81	□□□□□ -0.2
PCMT1-209	ENST00000494411	IGLC2	P0DOY2	106 aa		13.81	□□□□□ -0.2
PCMT1-209	ENST00000494411	CXCL2	P19875	107 aa		13.81	□□□□□ -0.2
PCMT1-209	ENST00000494411	CNN1	P51911	297 aa	Known RBP	13.81	□□□□□ -0.2
PCMT1-209	ENST00000494411	GCSAML	Q5JQS6	135 aa		13.81	□□□□□ -0.2
PCMT1-209	ENST00000494411	HSPB11	Q9Y547	144 aa		13.81	□□□□□ -0.2
PCMT1-209	ENST00000494411		A8MTW9	85 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411		H3BQ15	152 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	SLC17A3	O00476	420 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	DUSP14	O95147	198 aa	Known RBP	13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	PRB4	P10163	310 aa	Predicted RBP	13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	RPL12	P30050	165 aa	Known RBP	13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	FCN2	Q15485	313 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	PSG3	Q16557	428 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	AMTN	Q6UX39	209 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	OR11H7	Q8NGC8	314 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	ATP5S	Q99766	215 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	WDR61	Q9GZS3	305 aa	Known RBP	13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	MFF	Q9GZY8	342 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	MED28	Q9H204	178 aa		13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.8	□□□□□ -0.2
PCMT1-209	ENST00000494411	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.79	□□□□□ -0.2
PCMT1-209	ENST00000494411	SLC50A1	Q9BRV3	221 aa		13.79	□□□□□ -0.2
PCMT1-209	ENST00000494411	SMIM3	Q9BZL3	60 aa		13.79	□□□□□ -0.2
PCMT1-209	ENST00000494411	HRH4	Q9H3N8	390 aa		13.79	□□□□□ -0.2
PCMT1-209	ENST00000494411	IGHV3OR16-12	A0A075B7B8	117 aa		13.78	□□□□□ -0.2
PCMT1-209	ENST00000494411	HIST1H1A	Q02539	215 aa	Predicted RBP	13.78	□□□□□ -0.2
PCMT1-209	ENST00000494411	OR8A1	Q8NGG7	326 aa		13.78	□□□□□ -0.2
PCMT1-209	ENST00000494411	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.78	□□□□□ -0.2
PCMT1-209	ENST00000494411	RPUSD4	Q96CM3	377 aa	Known RBP	13.78	□□□□□ -0.2
PCMT1-209	ENST00000494411	KCNIP2	Q9NS61	270 aa		13.78	□□□□□ -0.2
PCMT1-209	ENST00000494411	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.77	□□□□□ -0.21
PCMT1-209	ENST00000494411	JTB	O76095	146 aa		13.77	□□□□□ -0.21
PCMT1-209	ENST00000494411	HYDIN	Q4G0P3	5121 aa		13.77	□□□□□ -0.21
PCMT1-209	ENST00000494411		M0R2Z0	102 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	GUK1	Q16774	197 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	SPINK13	Q1W4C9	94 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	RGS21	Q2M5E4	152 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	SAT2	Q96F10	170 aa	Predicted RBP	13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	NEU1	Q99519	415 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	ZNF586	Q9NXT0	402 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	TMEM14C	Q9P0S9	112 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	GOLT1B	Q9Y3E0	138 aa		13.76	□□□□□ -0.21
PCMT1-209	ENST00000494411	C17orf112	F2Z3M2	114 aa		13.75	□□□□□ -0.21
PCMT1-209	ENST00000494411	C1orf158	Q8N1D5	194 aa		13.75	□□□□□ -0.21
PCMT1-209	ENST00000494411	IGF2BP2-AS1	Q96M15	143 aa		13.75	□□□□□ -0.21
PCMT1-209	ENST00000494411	SLC25A2	Q9BXI2	301 aa		13.75	□□□□□ -0.21
PCMT1-209	ENST00000494411	KLK5	Q9Y337	293 aa	Predicted RBP	13.75	□□□□□ -0.21
PCMT1-209	ENST00000494411	BOLA2-SMG1P6	H3BVE0	249 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	IFNA5	P01569	189 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	AMBP	P02760	352 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	PYY	P10082	97 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	RHOB	P62745	196 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	MIR17HG	Q75NE6	70 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	WFDC1	Q9HC57	220 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	CELA1	Q9UNI1	258 aa		13.74	□□□□□ -0.21
PCMT1-209	ENST00000494411	SMIM9	A6NGZ8	99 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	PRAC2	D3DTV9	90 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	CRX	O43186	299 aa	Predicted RBP	13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	INS	P01308	110 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	BAP18	Q8IXM2	172 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	SCGB1C1	Q8TD33	95 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	FAM167A-AS1	Q96KT0	104 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	RFNG	Q9Y644	331 aa		13.73	□□□□□ -0.21
PCMT1-209	ENST00000494411	TRBV19	A0A075B6N1	114 aa		13.72	□□□□□ -0.21
PCMT1-209	ENST00000494411	HIST1H1E	P10412	219 aa	Known RBP	13.72	□□□□□ -0.21
PCMT1-209	ENST00000494411	EMP1	P54849	157 aa		13.72	□□□□□ -0.21
PCMT1-209	ENST00000494411	TMEM208	Q9BTX3	173 aa		13.72	□□□□□ -0.21
PCMT1-209	ENST00000494411	MRPL32	Q9BYC8	188 aa	Known RBP	13.72	□□□□□ -0.21
PCMT1-209	ENST00000494411	PPP1R14D	Q9NXH3	145 aa		13.72	□□□□□ -0.21
PCMT1-209	ENST00000494411	TRAV12-2	A0A075B6T6	113 aa		13.71	□□□□□ -0.21
PCMT1-209	ENST00000494411	ZNF253	O75346	499 aa		13.71	□□□□□ -0.21
PCMT1-209	ENST00000494411	NDUFB4	O95168	129 aa		13.71	□□□□□ -0.21

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