RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MRPL32Q9BYC8 188 aaKnown RBP9.93□□□□□ -0.82
COL1A1-208ENST00000494334 MFFQ9GZY8 342 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 ZNF331Q9NQX6 463 aaPredicted RBP9.93□□□□□ -0.82
COL1A1-208ENST00000494334 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 TMEM14CQ9P0S9 112 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 FUT9Q9Y231 359 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
COL1A1-208ENST00000494334 CA1P00915 261 aaPredicted RBP9.92□□□□□ -0.82
COL1A1-208ENST00000494334 GIG44P09565 113 aaPredicted RBP9.92□□□□□ -0.82
COL1A1-208ENST00000494334 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
COL1A1-208ENST00000494334 RPL7L1Q6DKI1 246 aaKnown RBP9.92□□□□□ -0.82
COL1A1-208ENST00000494334 RNF183Q96D59 192 aa9.92□□□□□ -0.82
COL1A1-208ENST00000494334 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
COL1A1-208ENST00000494334 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
COL1A1-208ENST00000494334 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
COL1A1-208ENST00000494334 AGRNO00468 2067 aa9.92□□□□□ -0.82
COL1A1-208ENST00000494334 A0A0J9YX75 114 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 HMSDA8MTL9 139 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 SLC17A3O00476 420 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 SPRY2O43597 315 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 PYYP10082 97 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 HIST1H1EP10412 219 aaKnown RBP9.91□□□□□ -0.82
COL1A1-208ENST00000494334 SPP1P10451 314 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 M6PRP20645 277 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 PSG3Q16557 428 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 GUK1Q16774 197 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
COL1A1-208ENST00000494334 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 MORN3Q6PF18 240 aaPredicted RBP9.91□□□□□ -0.82
COL1A1-208ENST00000494334 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
COL1A1-208ENST00000494334 PSMG3Q9BT73 122 aaPredicted RBP9.91□□□□□ -0.82
COL1A1-208ENST00000494334 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 BORCS7-ASMTA0A0B4J1R7 106 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 TAAR5O14804 337 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 IGKV3-20P01619 116 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 C4BPBP20851 252 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 RAB2AP61019 212 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 RHOBP62745 196 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 ZNF738Q8NE65 137 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 OR4B1Q8NGF8 309 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 OR2G3Q8NGZ4 309 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 OR51M1Q9H341 326 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
COL1A1-208ENST00000494334 COL7A1Q02388 2944 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 hCG_2014768A0A024R1R8 64 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 ZNF253O75346 499 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 EIF3GO75821 320 aaKnown RBP eCLIP9.89□□□□□ -0.83
COL1A1-208ENST00000494334 NDUFB4O95168 129 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
COL1A1-208ENST00000494334 NUTF2P61970 127 aaKnown RBP9.89□□□□□ -0.83
COL1A1-208ENST00000494334 ZNF345Q14585 488 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 KCNRGQ8N5I3 272 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 OR10G4Q8NGN3 311 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 OR10G7Q8NGN6 311 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 ZNF503Q96F45 646 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 PAXXQ9BUH6 204 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 SH3BGRL3Q9H299 93 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 EDA2RQ9HAV5 297 aa9.89□□□□□ -0.83
COL1A1-208ENST00000494334 ZNF705FA8MVS1 300 aaPredicted RBP9.88□□□□□ -0.83
COL1A1-208ENST00000494334 JTBO76095 146 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 OR10J4P0C629 311 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 NBEAP1P0C6P0 100 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
COL1A1-208ENST00000494334 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
COL1A1-208ENST00000494334 CNN1P51911 297 aaKnown RBP9.88□□□□□ -0.83
COL1A1-208ENST00000494334 SERF2P84101 59 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 PDE6HQ13956 83 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 CSNK1G2-AS1Q8NCQ2 148 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 BLNKQ8WV28 456 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 RNF141Q8WVD5 230 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 RPUSD4Q96CM3 377 aaKnown RBP9.88□□□□□ -0.83
COL1A1-208ENST00000494334 FXYD5Q96DB9 178 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 GNPNAT1Q96EK6 184 aaPredicted RBP9.88□□□□□ -0.83
COL1A1-208ENST00000494334 CLEC5AQ9NY25 188 aa9.88□□□□□ -0.83
COL1A1-208ENST00000494334 A0A0D9SG52 128 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 A0A1W2PPV4 95 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 A8MTW9 85 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 OR7C2O60412 319 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 DUSP14O95147 198 aaKnown RBP9.87□□□□□ -0.83
COL1A1-208ENST00000494334 FXYD7P58549 80 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 TAS2R45P59539 299 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 PSG9Q00887 426 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 FAM122CQ6P4D5 195 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 RPP25LQ8N5L8 163 aaKnown RBP9.87□□□□□ -0.83
COL1A1-208ENST00000494334 OR8A1Q8NGG7 326 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 RARRES2Q99969 163 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 ARPC5LQ9BPX5 153 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 SLC35B3Q9H1N7 401 aa9.87□□□□□ -0.83
COL1A1-208ENST00000494334 TENM3Q9P273 2699 aa9.86□□□□□ -0.83
COL1A1-208ENST00000494334 PRAC2D3DTV9 90 aa9.86□□□□□ -0.83
COL1A1-208ENST00000494334 MBP02144 154 aa9.86□□□□□ -0.83
COL1A1-208ENST00000494334 HIST1H1AQ02539 215 aaPredicted RBP9.86□□□□□ -0.83
COL1A1-208ENST00000494334 KHDC3LQ587J8 217 aa9.86□□□□□ -0.83
COL1A1-208ENST00000494334 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
COL1A1-208ENST00000494334 OR11H2Q8NH07 326 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms