RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
SATB1-217ENST00000493952 C11orf68Q9H3H3 251 aaKnown RBP11.73□□□□□ -0.53
SATB1-217ENST00000493952 X6R8D5 127 aa11.73□□□□□ -0.53
SATB1-217ENST00000493952 DYNC2H1Q8NCM8 4307 aaKnown RBP11.72□□□□□ -0.53
SATB1-217ENST00000493952 DEFB4AO15263 64 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 RGS21Q2M5E4 152 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 Q8NAQ8 132 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 LRRC20Q8TCA0 184 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 ATP5SQ99766 215 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 SLC35B3Q9H1N7 401 aa11.72□□□□□ -0.53
SATB1-217ENST00000493952 A8MTW9 85 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 H3BTX0 84 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 SLC17A3O00476 420 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 IGLC2P0DOY2 106 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 CXCL2P19875 107 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 PSG9Q00887 426 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 PMS2P11Q13670 270 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
SATB1-217ENST00000493952 IGHV4-28A0A0C4DH34 117 aa11.7□□□□□ -0.54
SATB1-217ENST00000493952 H3BQ15 152 aa11.7□□□□□ -0.54
SATB1-217ENST00000493952 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
SATB1-217ENST00000493952 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
SATB1-217ENST00000493952 PRB4P10163 310 aaPredicted RBP11.7□□□□□ -0.54
SATB1-217ENST00000493952 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
SATB1-217ENST00000493952 PSG3Q16557 428 aa11.7□□□□□ -0.54
SATB1-217ENST00000493952 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
SATB1-217ENST00000493952 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
SATB1-217ENST00000493952 HRH4Q9H3N8 390 aa11.7□□□□□ -0.54
SATB1-217ENST00000493952 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
SATB1-217ENST00000493952 CXorf65A6NEN9 183 aa11.69□□□□□ -0.54
SATB1-217ENST00000493952 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
SATB1-217ENST00000493952 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
SATB1-217ENST00000493952 MIFP14174 115 aa11.69□□□□□ -0.54
SATB1-217ENST00000493952 OXA1LQ15070 435 aa11.69□□□□□ -0.54
SATB1-217ENST00000493952 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
SATB1-217ENST00000493952 MFFQ9GZY8 342 aa11.69□□□□□ -0.54
SATB1-217ENST00000493952 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
SATB1-217ENST00000493952 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
SATB1-217ENST00000493952 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
SATB1-217ENST00000493952 OR8A1Q8NGG7 326 aa11.68□□□□□ -0.54
SATB1-217ENST00000493952 SAT2Q96F10 170 aaPredicted RBP11.68□□□□□ -0.54
SATB1-217ENST00000493952 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
SATB1-217ENST00000493952 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
SATB1-217ENST00000493952 C17orf112F2Z3M2 114 aa11.67□□□□□ -0.54
SATB1-217ENST00000493952 GIPP09681 153 aaPredicted RBP11.67□□□□□ -0.54
SATB1-217ENST00000493952 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
SATB1-217ENST00000493952 HIST1H1AQ02539 215 aaPredicted RBP11.67□□□□□ -0.54
SATB1-217ENST00000493952 Q5BKY6 102 aa11.67□□□□□ -0.54
SATB1-217ENST00000493952 C11orf45Q8TAV5 145 aa11.67□□□□□ -0.54
SATB1-217ENST00000493952 RPUSD4Q96CM3 377 aaKnown RBP11.67□□□□□ -0.54
SATB1-217ENST00000493952 SLC25A2Q9BXI2 301 aa11.67□□□□□ -0.54
SATB1-217ENST00000493952 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
SATB1-217ENST00000493952 LYSTQ99698 3801 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
SATB1-217ENST00000493952 IFNA5P01569 189 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 PYYP10082 97 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 GUK1Q16774 197 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 MIR17HGQ75NE6 70 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 SCGB1C1Q8TD33 95 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 FAM167A-AS1Q96KT0 104 aa11.66□□□□□ -0.54
SATB1-217ENST00000493952 RYR3Q15413 4870 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 LCE6AA0A183 80 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 NUPR2A6NF83 97 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 M0R2Z0 102 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 C1orf158Q8N1D5 194 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 ASB13Q8WXK3 278 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
SATB1-217ENST00000493952 RFNGQ9Y644 331 aa11.65□□□□□ -0.54
SATB1-217ENST00000493952 TRBV19A0A075B6N1 114 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
SATB1-217ENST00000493952 ZNF253O75346 499 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 HIST1H1EP10412 219 aaKnown RBP11.64□□□□□ -0.55
SATB1-217ENST00000493952 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 NEU1Q99519 415 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 MRPL32Q9BYC8 188 aaKnown RBP11.64□□□□□ -0.55
SATB1-217ENST00000493952 FUT9Q9Y231 359 aa11.64□□□□□ -0.55
SATB1-217ENST00000493952 BOLA2-SMG1P6H3BVE0 249 aa11.63□□□□□ -0.55
SATB1-217ENST00000493952 NDUFB4O95168 129 aa11.63□□□□□ -0.55
SATB1-217ENST00000493952 RHOBP62745 196 aa11.63□□□□□ -0.55
SATB1-217ENST00000493952 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
SATB1-217ENST00000493952 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
SATB1-217ENST00000493952 CELA1Q9UNI1 258 aa11.63□□□□□ -0.55
SATB1-217ENST00000493952 GOLT1BQ9Y3E0 138 aa11.63□□□□□ -0.55
SATB1-217ENST00000493952 SACSQ9NZJ4 4579 aa11.63□□□□□ -0.55
SATB1-217ENST00000493952 PLECQ15149 4684 aaKnown RBP11.63□□□□□ -0.55
SATB1-217ENST00000493952 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
SATB1-217ENST00000493952 AMBPP02760 352 aa11.62□□□□□ -0.55
SATB1-217ENST00000493952 BAP18Q8IXM2 172 aa11.62□□□□□ -0.55
SATB1-217ENST00000493952 OR2T35Q8NGX2 323 aa11.62□□□□□ -0.55
SATB1-217ENST00000493952 BLNKQ8WV28 456 aa11.62□□□□□ -0.55
SATB1-217ENST00000493952 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
SATB1-217ENST00000493952 TRAV12-2A0A075B6T6 113 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms