RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RBMY1DP0C7P1 496 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 RPP25LQ8N5L8 163 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 ISLRO14498 428 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 SPP1P10451 314 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 MEOX2P50222 304 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 LRRC20Q8TCA0 184 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 ASCL2Q99929 193 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 HRH4Q9H3N8 390 aa13.24□□□□□ -0.29
PDLIM7-208ENST00000493815 OR7C2O60412 319 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 ID1P41134 155 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 PSMB3P49720 205 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 ZNF503Q96F45 646 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 TMEM14CQ9P0S9 112 aa13.23□□□□□ -0.29
PDLIM7-208ENST00000493815 RPL35AP18077 110 aaKnown RBP13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 TMEM41BQ5BJD5 291 aa13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 PAXXQ9BUH6 204 aa13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
PDLIM7-208ENST00000493815 A8MZ25 164 aa13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 MBP02144 154 aa13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 AKR1C8PQ5T2L2 129 aa13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 BAP18Q8IXM2 172 aa13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 RAB24Q969Q5 203 aa13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 SAT2Q96F10 170 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-208ENST00000493815 F6UB75 175 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 KHDC3LQ587J8 217 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 GDF5OSQ5U4N7 250 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 LCN15Q6UWW0 184 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 SBSPONQ8IVN8 264 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 RNF141Q8WVD5 230 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 TMED6Q8WW62 240 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 FXYD5Q96DB9 178 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 BOLA1Q9Y3E2 137 aa13.21□□□□□ -0.3
PDLIM7-208ENST00000493815 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
PDLIM7-208ENST00000493815 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-208ENST00000493815 FHITP49789 147 aa13.2□□□□□ -0.3
PDLIM7-208ENST00000493815 TAS2R45P59539 299 aa13.2□□□□□ -0.3
PDLIM7-208ENST00000493815 ZNF726P1Q15940 193 aa13.2□□□□□ -0.3
PDLIM7-208ENST00000493815 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-208ENST00000493815 NDUFB4O95168 129 aa13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 UBE2L3P68036 154 aaKnown RBP13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 STOML3Q8TAV4 291 aa13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 ACTR3CQ9C0K3 210 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 AGRNO00468 2067 aa13.19□□□□□ -0.3
PDLIM7-208ENST00000493815 LOC102724200A0A096LPH7 203 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 SEC11BP0C7V7 166 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 ZNF705DP0CH99 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 ZNF705BP0CI00 300 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 GUK1Q16774 197 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 HAGHQ16775 308 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 STHQ8IWL8 128 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 EXOC3-AS1Q8N2X6 119 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 PHYHIPLQ96FC7 376 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
PDLIM7-208ENST00000493815 NBEAL2Q6ZNJ1 2754 aa13.17□□□□□ -0.3
PDLIM7-208ENST00000493815 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
PDLIM7-208ENST00000493815 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
PDLIM7-208ENST00000493815 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
PDLIM7-208ENST00000493815 PSG3Q16557 428 aa13.17□□□□□ -0.3
PDLIM7-208ENST00000493815 SLC51BQ86UW2 128 aa13.17□□□□□ -0.3
PDLIM7-208ENST00000493815 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
PDLIM7-208ENST00000493815 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
PDLIM7-208ENST00000493815 SAV1Q9H4B6 383 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-208ENST00000493815 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
PDLIM7-208ENST00000493815 H3BMM0 161 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 M0R3E3 92 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 TGP01266 2768 aa13.15□□□□□ -0.3
PDLIM7-208ENST00000493815 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 PRAC2D3DTV9 90 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 HLA-DRB4P13762 266 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 PDE6HQ13956 83 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 ICAM4Q14773 271 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.31
PDLIM7-208ENST00000493815 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms