RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 DNAH17Q9UFH2 4485 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 CENPXA8MT69 81 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 TSC22D2O75157 780 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 CXCL2P19875 107 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 ANXA7P20073 488 aaKnown RBP11.73□□□□□ -0.53
PTPRU-208ENST00000493601 TAS2R30P59541 319 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 PSG3Q16557 428 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 BAK1Q16611 211 aa11.73□□□□□ -0.53
PTPRU-208ENST00000493601 IAH1Q2TAA2 248 aaPredicted RBP11.73□□□□□ -0.53
PTPRU-208ENST00000493601 PRM2P04554 102 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 DEFB130BP0DP73 79 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 DEFB130AP0DP74 79 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 C16orf74Q96GX8 76 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 LINC01587Q99440 93 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 ATG101Q9BSB4 218 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 ARV1Q9H2C2 271 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 PKD1P98161 4303 aa11.72□□□□□ -0.53
PTPRU-208ENST00000493601 LINC00854A0A1B0GVQ3 168 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 PLAC8L1A1L4L8 177 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 GOSR2O14653 212 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 BTCP35070 178 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 TAS2R60P59551 318 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 PATE2Q6UY27 113 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 ZBTB8BQ8NAP8 495 aaPredicted RBP11.71□□□□□ -0.53
PTPRU-208ENST00000493601 RPUSD4Q96CM3 377 aaKnown RBP11.71□□□□□ -0.53
PTPRU-208ENST00000493601 GGACTQ9BVM4 153 aa11.71□□□□□ -0.53
PTPRU-208ENST00000493601 RCL1Q9Y2P8 373 aaKnown RBP11.71□□□□□ -0.53
PTPRU-208ENST00000493601 ATP5G1P05496 136 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 AZU1P20160 251 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 CDKN1BP46527 198 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 ATP5G3P48201 142 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 CNPY1Q3B7I2 92 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 MITD1Q8WV92 249 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
PTPRU-208ENST00000493601 F5H768 121 aa11.69□□□□□ -0.54
PTPRU-208ENST00000493601 AGPAT2O15120 278 aa11.69□□□□□ -0.54
PTPRU-208ENST00000493601 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
PTPRU-208ENST00000493601 COX7A2P2O60397 106 aa11.69□□□□□ -0.54
PTPRU-208ENST00000493601 HTN1P15515 57 aa11.69□□□□□ -0.54
PTPRU-208ENST00000493601 BPIFA4PQ86YQ2 179 aa11.69□□□□□ -0.54
PTPRU-208ENST00000493601 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
PTPRU-208ENST00000493601 TIMM8BQ9Y5J9 83 aaPredicted RBP11.69□□□□□ -0.54
PTPRU-208ENST00000493601 CBY3A6NI87 242 aa11.68□□□□□ -0.54
PTPRU-208ENST00000493601 MBPP02686 304 aaPredicted RBP11.68□□□□□ -0.54
PTPRU-208ENST00000493601 FCN2Q15485 313 aa11.68□□□□□ -0.54
PTPRU-208ENST00000493601 ZNF493Q6ZR52 646 aa11.68□□□□□ -0.54
PTPRU-208ENST00000493601 TMEM263Q8WUH6 116 aaKnown RBP11.68□□□□□ -0.54
PTPRU-208ENST00000493601 SDHCQ99643 169 aaPredicted RBP11.68□□□□□ -0.54
PTPRU-208ENST00000493601 C20orf144Q9BQM9 153 aa11.68□□□□□ -0.54
PTPRU-208ENST00000493601 C7orf66A4D0T2 115 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 H7BYZ3 331 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 L7N2F9 121 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 NUDT3O95989 172 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 IL7P13232 177 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 VAMP2P63027 116 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 ZNF846Q147U1 533 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
PTPRU-208ENST00000493601 C20orf85Q9H1P6 137 aa11.67□□□□□ -0.54
PTPRU-208ENST00000493601 CCL18P55774 89 aa11.66□□□□□ -0.54
PTPRU-208ENST00000493601 RAB31Q13636 194 aa11.66□□□□□ -0.54
PTPRU-208ENST00000493601 C10orf113Q5VZT2 155 aa11.66□□□□□ -0.54
PTPRU-208ENST00000493601 MGST2Q99735 147 aa11.66□□□□□ -0.54
PTPRU-208ENST00000493601 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
PTPRU-208ENST00000493601 SLC17A3O00476 420 aa11.65□□□□□ -0.54
PTPRU-208ENST00000493601 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
PTPRU-208ENST00000493601 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
PTPRU-208ENST00000493601 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
PTPRU-208ENST00000493601 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
PTPRU-208ENST00000493601 DNAH11Q96DT5 4516 aa11.65□□□□□ -0.55
PTPRU-208ENST00000493601 NBDYA0A0U1RRE5 68 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 CCSO14618 274 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
PTPRU-208ENST00000493601 IGLC2P0DOY2 106 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 CAMLGP49069 296 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 BCAP31P51572 246 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 OPCMLQ14982 345 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 GUK1Q16774 197 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 MORN5Q5VZ52 161 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 Q6ZRG5 221 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
PTPRU-208ENST00000493601 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
PTPRU-208ENST00000493601 MUC4Q99102 2169 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 FAM25EA8MYX2 175 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 CAV2P51636 162 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 CLINT1Q14677 625 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 GFI1BQ5VTD9 330 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 ZNF575Q86XF7 245 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 CCDC28AQ8IWP9 274 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
PTPRU-208ENST00000493601 LSM5Q9Y4Y9 91 aaKnown RBP11.63□□□□□ -0.55
PTPRU-208ENST00000493601 H3BTX0 84 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 LYRM1O43325 122 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 NRARPQ7Z6K4 114 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms