RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 VPREB3Q9UKI3 123 aa10.86□□□□□ -0.67
PTPN7-216ENST00000492977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
PTPN7-216ENST00000492977 CLPSL1A2RUU4 121 aa10.85□□□□□ -0.67
PTPN7-216ENST00000492977 K7EQM0 130 aa10.85□□□□□ -0.67
PTPN7-216ENST00000492977 PHOX2AO14813 284 aa10.85□□□□□ -0.67
PTPN7-216ENST00000492977 BUB3O43684 328 aa10.85□□□□□ -0.67
PTPN7-216ENST00000492977 ARL3P36405 182 aa10.85□□□□□ -0.67
PTPN7-216ENST00000492977 METTL26Q96S19 204 aa10.85□□□□□ -0.67
PTPN7-216ENST00000492977 ABCA12Q86UK0 2595 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 ZNF320A2RRD8 509 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 TMEM89A2RUT3 159 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 PF4V1P10720 104 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 RPL15P61313 204 aaKnown RBP10.84□□□□□ -0.67
PTPN7-216ENST00000492977 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 TMEM75Q8N9X5 138 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 NHLRC2Q8NBF2 726 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 WFDC11Q8NEX6 87 aa10.84□□□□□ -0.67
PTPN7-216ENST00000492977 IGHV3OR16-8A0A075B7F1 116 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 A0A087X0K7 114 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 SERTM2A0A1B0GWG4 89 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BKO60814 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 IGLV2-11P01706 119 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BJP06899 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BOP23527 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BBP33778 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BDP58876 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BCP62807 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST2H2BEQ16778 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.83□□□□□ -0.68
PTPN7-216ENST00000492977 FRZBQ92765 325 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BHQ93079 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BNQ99877 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 HIST1H2BMQ99879 126 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 KLK15Q9H2R5 256 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 SMAD5-AS1Q9Y6J3 95 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 U3KQE9 123 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 CENPEQ02224 2701 aa10.83□□□□□ -0.68
PTPN7-216ENST00000492977 ZNF705GA8MUZ8 300 aaPredicted RBP10.82□□□□□ -0.68
PTPN7-216ENST00000492977 DIRC3C9JPN6 131 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 NDUFA4O00483 81 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 UBE2CO00762 179 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 IGHG4P01861 327 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 TRGC1P0CF51 173 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 CSN1S1P47710 185 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 FAM209BQ5JX69 171 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 Q86TA4 180 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 TMEM183AQ8IXX5 376 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 SGK494Q96LW2 274 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 PRSS22Q9GZN4 317 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 CSMD1Q96PZ7 3565 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 SMIM27A0A1W2PRY6 76 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
PTPN7-216ENST00000492977 PSG3Q16557 428 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 NUDT10Q8NFP7 164 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 OR4X2Q8NGF9 303 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 NUDT11Q96G61 164 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 FOXC2Q99958 501 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 SERTAD4Q9NUC0 356 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 ZNF492Q9P255 531 aa10.82□□□□□ -0.68
PTPN7-216ENST00000492977 CSMD2Q7Z408 3487 aa10.81□□□□□ -0.68
PTPN7-216ENST00000492977 APCP25054 2843 aa10.81□□□□□ -0.68
PTPN7-216ENST00000492977 ZNF785A8K8V0 405 aa10.81□□□□□ -0.68
PTPN7-216ENST00000492977 MEOX2P50222 304 aa10.81□□□□□ -0.68
PTPN7-216ENST00000492977 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
PTPN7-216ENST00000492977 CIARTQ8N365 385 aaPredicted RBP10.81□□□□□ -0.68
PTPN7-216ENST00000492977 NPFFR1Q9GZQ6 430 aa10.81□□□□□ -0.68
PTPN7-216ENST00000492977 MAP1AP78559 2803 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-216ENST00000492977 TRAV8-1A0A0A6YYK1 113 aa10.8□□□□□ -0.68
PTPN7-216ENST00000492977 FBLL1A6NHQ2 334 aaKnown RBP10.8□□□□□ -0.68
PTPN7-216ENST00000492977 HOXA3O43365 443 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-216ENST00000492977 PSMB8P28062 276 aa10.8□□□□□ -0.68
PTPN7-216ENST00000492977 NDUFA6P56556 154 aa10.8□□□□□ -0.68
PTPN7-216ENST00000492977 PRR27Q6MZM9 219 aa10.8□□□□□ -0.68
PTPN7-216ENST00000492977 PRNTQ86SH4 94 aa10.8□□□□□ -0.68
PTPN7-216ENST00000492977 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
PTPN7-216ENST00000492977 CREBBPQ92793 2442 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 C19orf71A6NCJ1 209 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 M0R3E3 92 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 SMAD7O15105 426 aaKnown RBP10.79□□□□□ -0.68
PTPN7-216ENST00000492977 TRBV12-3P01733 135 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 HOXA5P20719 270 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 TMEM95Q3KNT9 176 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 COX19Q49B96 90 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 DAZAP1Q96EP5 407 aaKnown RBP10.79□□□□□ -0.68
PTPN7-216ENST00000492977 SLC50A1Q9BRV3 221 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 PSG8Q9UQ74 426 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 TRAPPC1Q9Y5R8 145 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
PTPN7-216ENST00000492977 APOHP02749 345 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-216ENST00000492977 SLC35B1P78383 322 aa10.78□□□□□ -0.68
PTPN7-216ENST00000492977 CT83Q5H943 113 aa10.78□□□□□ -0.68
PTPN7-216ENST00000492977 C16orf54Q6UWD8 224 aa10.78□□□□□ -0.68
PTPN7-216ENST00000492977 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
PTPN7-216ENST00000492977 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
PTPN7-216ENST00000492977 ZNF702PQ9H963 129 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms