RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 NUTF2P61970 127 aaKnown RBP10.26□□□□□ -0.77
CCM2-217ENST00000492883 RHOBP62745 196 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 ZNF738Q8NE65 137 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 OR4B1Q8NGF8 309 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 OVOL2Q9BRP0 275 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 SLC50A1Q9BRV3 221 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 TMEM14CQ9P0S9 112 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
CCM2-217ENST00000492883 PRKDCP78527 4128 aaKnown RBP10.25□□□□□ -0.77
CCM2-217ENST00000492883 hCG_2014768A0A024R1R8 64 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 A0A1W2PPV4 95 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 F6UB75 175 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 TAAR5O14804 337 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 HIST1H1EP10412 219 aaKnown RBP10.25□□□□□ -0.77
CCM2-217ENST00000492883 M6PRP20645 277 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 ATP6V0CP27449 155 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 HLA-DMBP28068 263 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 PSG3Q16557 428 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 RPL7L1Q6DKI1 246 aaKnown RBP10.25□□□□□ -0.77
CCM2-217ENST00000492883 WWC2-AS2Q96NR7 200 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 SLC25A2Q9BXI2 301 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 OR51M1Q9H341 326 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 ZNF331Q9NQX6 463 aaPredicted RBP10.25□□□□□ -0.77
CCM2-217ENST00000492883 ZNF586Q9NXT0 402 aa10.25□□□□□ -0.77
CCM2-217ENST00000492883 HMSDA8MTL9 139 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 PYYP10082 97 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 TAS2R45P59539 299 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 TMEM41BQ5BJD5 291 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 OR11H4Q8NGC9 324 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 RNF183Q96D59 192 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 SAT2Q96F10 170 aaPredicted RBP10.24□□□□□ -0.77
CCM2-217ENST00000492883 FAM167A-AS1Q96KT0 104 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 PSMG3Q9BT73 122 aaPredicted RBP10.24□□□□□ -0.77
CCM2-217ENST00000492883 PAXXQ9BUH6 204 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
CCM2-217ENST00000492883 TRBV19A0A075B6N1 114 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 A0A0J9YX75 114 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 SLC17A3O00476 420 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 OR7C2O60412 319 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 JTBO76095 146 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 DUSP14O95147 198 aaKnown RBP10.23□□□□□ -0.77
CCM2-217ENST00000492883 ZNF705DP0CH99 300 aaPredicted RBP10.23□□□□□ -0.77
CCM2-217ENST00000492883 ZNF705BP0CI00 300 aaPredicted RBP10.23□□□□□ -0.77
CCM2-217ENST00000492883 RAB2AP61019 212 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 SERF2P84101 59 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 PSG9Q00887 426 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 OR10G4Q8NGN3 311 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 OR10G9Q8NGN4 311 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 OR10G7Q8NGN6 311 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 RNF141Q8WVD5 230 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 RPUSD4Q96CM3 377 aaKnown RBP10.23□□□□□ -0.77
CCM2-217ENST00000492883 GNPNAT1Q96EK6 184 aaPredicted RBP10.23□□□□□ -0.77
CCM2-217ENST00000492883 ST6GAL2Q96JF0 529 aa10.23□□□□□ -0.77
CCM2-217ENST00000492883 A0A0D9SG52 128 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 MBP02144 154 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 OR10J4P0C629 311 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 NBEAP1P0C6P0 100 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
CCM2-217ENST00000492883 C4BPBP20851 252 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 FXYD7P58549 80 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 ZNF345Q14585 488 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 KHDC3LQ587J8 217 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 FAM122CQ6P4D5 195 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 KCNRGQ8N5I3 272 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 OR2G3Q8NGZ4 309 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 RARRES2Q99969 163 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 C1QTNF4Q9BXJ3 329 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 SH3BGRL3Q9H299 93 aa10.22□□□□□ -0.77
CCM2-217ENST00000492883 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.77
CCM2-217ENST00000492883 ZNF253O75346 499 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 EIF3GO75821 320 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCM2-217ENST00000492883 GIG44P09565 113 aaPredicted RBP10.21□□□□□ -0.77
CCM2-217ENST00000492883 CNN1P51911 297 aaKnown RBP10.21□□□□□ -0.77
CCM2-217ENST00000492883 HIST1H1AQ02539 215 aaPredicted RBP10.21□□□□□ -0.77
CCM2-217ENST00000492883 PDE6HQ13956 83 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 OR8A1Q8NGG7 326 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 OR11H2Q8NH07 326 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 AAMDCQ9H7C9 122 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 CYTL1Q9NRR1 136 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 PPP1R14DQ9NXH3 145 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 XCL2Q9UBD3 114 aa10.21□□□□□ -0.77
CCM2-217ENST00000492883 KANTRA0A1W2PQU2 76 aa10.2□□□□□ -0.78
CCM2-217ENST00000492883 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
CCM2-217ENST00000492883 NDUFB4O95168 129 aa10.2□□□□□ -0.78
CCM2-217ENST00000492883 UBE2L3P68036 154 aaKnown RBP10.2□□□□□ -0.78
CCM2-217ENST00000492883 TCTE3Q8IZS6 198 aa10.2□□□□□ -0.78
CCM2-217ENST00000492883 FXYD5Q96DB9 178 aa10.2□□□□□ -0.78
CCM2-217ENST00000492883 SLC35B3Q9H1N7 401 aa10.2□□□□□ -0.78
CCM2-217ENST00000492883 PFDN1O60925 122 aa10.19□□□□□ -0.78
CCM2-217ENST00000492883 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
CCM2-217ENST00000492883 AKAP14Q86UN6 197 aa10.19□□□□□ -0.78
CCM2-217ENST00000492883 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
CCM2-217ENST00000492883 RPP25LQ8N5L8 163 aaKnown RBP10.19□□□□□ -0.78
CCM2-217ENST00000492883 OR10J6PQ8NGY7 276 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms