RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 HYLS1Q96M11 299 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 GGACTQ9BVM4 153 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 OR52A1Q9UKL2 312 aa0.67□□□□□ -2.3
HMGB1P30-201ENST00000492455 ASCC3Q8N3C0 2202 aaKnown RBP0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 KDM6AO15550 1401 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 TRAV27A0A087WT01 109 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 K7ERJ3 54 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 HIST1H2BKO60814 126 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 DNAL4O96015 105 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 IFNA4P05014 189 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 HIST1H2BJP06899 126 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 CXCL8P10145 99 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 NEFHP12036 1026 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 VBP1P61758 197 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 PSG9Q00887 426 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 KLRD1Q13241 179 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 LINC00322Q6ZN03 302 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 FAM24BQ8N5W8 94 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 MUCL1Q96DR8 90 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 OTORQ9NRC9 128 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 TMEM14CQ9P0S9 112 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 LAMTOR3Q9UHA4 124 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 ROCK1Q13464 1354 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 RFX7Q2KHR2 1363 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 FBN2P35556 2912 aa0.66□□□□□ -2.3
HMGB1P30-201ENST00000492455 LAMB4A4D0S4 1761 aa0.65□□□□□ -2.3
HMGB1P30-201ENST00000492455 MAP1LC3B2A6NCE7 125 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 OR2T8A6NH00 312 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 F8W1H4 67 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 GPR31O00270 319 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 KLF7O75840 302 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 TMEM78Q5T7P6 136 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 DCUN1D2Q6PH85 259 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 TMEM14EPQ6UXP3 125 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 ARPINQ7Z6K5 226 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 ZNF431Q8TF32 576 aaPredicted RBP0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 DYDC1Q8WWB3 177 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 ZC2HC1AQ96GY0 325 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 OR2H1Q9GZK4 316 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 MAP1LC3BQ9GZQ8 125 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 PCBD2Q9H0N5 130 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 MED11Q9P086 117 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 NUBP2Q9Y5Y2 271 aa0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 MYO18AQ92614 2054 aaKnown RBP0.65□□□□□ -2.31
HMGB1P30-201ENST00000492455 CD109Q6YHK3 1445 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 YTHDC2Q9H6S0 1430 aaKnown RBP0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 hDV103S1A0JD37 113 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 CST7O76096 145 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 FABP1P07148 127 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 COX7CP15954 63 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 RPL35P42766 123 aaKnown RBP0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 TEN1Q86WV5 123 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 PRR15Q8IV56 129 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 OR5AS1Q8N127 324 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 LRRC18Q8N456 261 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 AMELYQ99218 206 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 LRTM1Q9HBL6 345 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 SMPXQ9UHP9 88 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 MCM3APO60318 1980 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 NUP98P52948 1817 aa0.64□□□□□ -2.31
HMGB1P30-201ENST00000492455 H3BQV1 296 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 H3BRM9 83 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 EIF3IQ13347 325 aaKnown RBP0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 FAM216BQ8N7L0 139 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 OR10AG1Q8NH19 301 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 ISOC1Q96CN7 298 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 BORCS8Q96FH0 119 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 NAT8BQ9UHF3 227 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 ATPIF1Q9UII2 106 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 V9GYQ6 96 aa0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 MYO5AQ9Y4I1 1855 aaKnown RBP0.63□□□□□ -2.31
HMGB1P30-201ENST00000492455 SYNMO15061 1565 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 CHD3Q12873 2000 aaKnown RBP0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 MYH2Q9UKX2 1941 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 CAMSAP2Q08AD1 1489 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 CECR2Q9BXF3 1484 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 RTL9Q8NET4 1388 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 IGLV3-32A0A0A0MS00 114 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 A0A1W2PRE2 83 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 H7BYZ3 331 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 NCR3O14931 201 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 LYRM1O43325 122 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 HAGHLQ6PII5 290 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 CROCCP2Q86T23 111 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 GKN2Q86XP6 184 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 STX12Q86Y82 276 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 PSMF1Q92530 271 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 CENPHQ9H3R5 247 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 TAF9BQ9HBM6 251 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 TMEM138Q9NPI0 162 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 TNFSF18Q9UNG2 199 aa0.62□□□□□ -2.31
HMGB1P30-201ENST00000492455 CNTRLQ7Z7A1 2325 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 COL1A1P02452 1464 aaPredicted RBP0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 TET1Q8NFU7 2136 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 TRDV1A0A1B0GX56 115 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 C9orf170A2RU37 121 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 C5orf67F2Z3F1 127 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms