RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 UHRF2Q96PU4 802 aa8.69□□□□□ -1.02
TREX1-204ENST00000492235 LINC01587Q99440 93 aa8.69□□□□□ -1.02
TREX1-204ENST00000492235 PAIP2BQ9ULR5 123 aaKnown RBP8.69□□□□□ -1.02
TREX1-204ENST00000492235 TRAV8-2A0A0B4J237 113 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 EPM2AB3EWF7 344 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 BOLA2-SMG1P6H3BVE0 249 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 H2AFB2P0C5Z0 115 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 ORM2P19652 201 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
TREX1-204ENST00000492235 RAB11AP62491 216 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 RPP30P78346 268 aaKnown RBP8.68□□□□□ -1.02
TREX1-204ENST00000492235 FGL1Q08830 312 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 THAP8Q8NA92 274 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 ZNF738Q8NE65 137 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 OR1B1Q8NGR6 318 aa8.68□□□□□ -1.02
TREX1-204ENST00000492235 ZNF431Q8TF32 576 aaPredicted RBP8.68□□□□□ -1.02
TREX1-204ENST00000492235 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
TREX1-204ENST00000492235 SYNGR2O43760 224 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 PRAF2O60831 178 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 IL5P05113 134 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 HOXB5P09067 269 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 PRB4P10163 310 aaPredicted RBP8.67□□□□□ -1.02
TREX1-204ENST00000492235 IAPPP10997 89 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 RHOBP62745 196 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 ID3Q02535 119 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 OR5I1Q13606 314 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 TMEM182Q6ZP80 229 aaPredicted RBP8.67□□□□□ -1.02
TREX1-204ENST00000492235 OR4D5Q8NGN0 318 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 Q9H3A6 140 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 NOP10Q9NPE3 64 aaKnown RBP8.67□□□□□ -1.02
TREX1-204ENST00000492235 SLC45A2Q9UMX9 530 aa8.67□□□□□ -1.02
TREX1-204ENST00000492235 TIMM8BQ9Y5J9 83 aaPredicted RBP8.67□□□□□ -1.02
TREX1-204ENST00000492235 TRAV6A0A075B6T7 132 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 CFDP00746 253 aaPredicted RBP8.66□□□□□ -1.02
TREX1-204ENST00000492235 TAS2R60P59551 318 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 HIST1H1AQ02539 215 aaPredicted RBP8.66□□□□□ -1.02
TREX1-204ENST00000492235 TMEM144Q7Z5S9 345 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 BPIFCQ8NFQ6 507 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 GNPNAT1Q96EK6 184 aaPredicted RBP8.66□□□□□ -1.02
TREX1-204ENST00000492235 GPR82Q96P67 336 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 TMEM147Q9BVK8 224 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
TREX1-204ENST00000492235 PPP1R14DQ9NXH3 145 aa8.66□□□□□ -1.02
TREX1-204ENST00000492235 FAT1Q14517 4588 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 A0A0J9YY99 117 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 ADAP1O75689 374 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
TREX1-204ENST00000492235 IFITM3Q01628 133 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 TMEM256Q8N2U0 113 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 C12orf45Q8N5I9 185 aaPredicted RBP8.65□□□□□ -1.02
TREX1-204ENST00000492235 MARVELD1Q9BSK0 173 aa8.65□□□□□ -1.02
TREX1-204ENST00000492235 WRBO00258 174 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 M6PRP20645 277 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 TAS2R30P59541 319 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 ESRGQ1W209 222 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 IAH1Q2TAA2 248 aaPredicted RBP8.64□□□□□ -1.03
TREX1-204ENST00000492235 NRARPQ7Z6K4 114 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
TREX1-204ENST00000492235 RXFP4Q8TDU9 374 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 ZNF586Q9NXT0 402 aa8.64□□□□□ -1.03
TREX1-204ENST00000492235 A0A1W2PPQ1 181 aa8.63□□□□□ -1.03
TREX1-204ENST00000492235 H3BRN7 92 aa8.63□□□□□ -1.03
TREX1-204ENST00000492235 HOXA5P20719 270 aa8.63□□□□□ -1.03
TREX1-204ENST00000492235 S100A7P31151 101 aa8.63□□□□□ -1.03
TREX1-204ENST00000492235 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
TREX1-204ENST00000492235 AKR1C1Q04828 323 aa8.63□□□□□ -1.03
TREX1-204ENST00000492235 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
TREX1-204ENST00000492235 ZBTB8BQ8NAP8 495 aaPredicted RBP8.63□□□□□ -1.03
TREX1-204ENST00000492235 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
TREX1-204ENST00000492235 STRAPQ9Y3F4 350 aaKnown RBP8.63□□□□□ -1.03
TREX1-204ENST00000492235 PRSS46E5RG02 174 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 INMT-MINDY4F8WBC2 141 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 TSC22D2O75157 780 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 PTTG1O95997 202 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 RPL7P18124 248 aaKnown RBP8.62□□□□□ -1.03
TREX1-204ENST00000492235 CXCL3P19876 107 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 CDKN1BP46527 198 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 LINC00315P59091 139 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 PSG3Q16557 428 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 LRRC20Q8TCA0 184 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 ZNF503Q96F45 646 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 SMIM8Q96KF7 97 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 SEC22CQ9BRL7 303 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 SHANK2-AS3Q9BTD1 123 aa8.62□□□□□ -1.03
TREX1-204ENST00000492235 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
TREX1-204ENST00000492235 GAGE12BA1L429 117 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 FNDC10F2Z333 226 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 H7BYZ3 331 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 GAGE7O76087 117 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 GAGE12FP0CL80 117 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 GAGE12GP0CL81 117 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 GAGE12IP0CL82 117 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 RAP2BP61225 183 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms