RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 M0R2Z0 102 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 PRM2P04554 102 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 SPINK13Q1W4C9 94 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 IAH1Q2TAA2 248 aaPredicted RBP5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 VWC2Q2TAL6 325 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 TRIQKQ629K1 86 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 S100A7AQ86SG5 101 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 TMEM256Q8N2U0 113 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 TMEM37Q8WXS4 190 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 SAT2Q96F10 170 aaPredicted RBP5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 ARV1Q9H2C2 271 aa5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 ZNF331Q9NQX6 463 aaPredicted RBP5.9□□□□□ -1.46
SMARCB1-207ENST00000491967 PKD1P98161 4303 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 AGPAT2O15120 278 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 INSP01308 110 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 OR5G3P0C626 314 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 IGLC2P0DOY2 106 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 AZU1P20160 251 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 INPP1P49441 399 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 TAS2R60P59551 318 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 DAD1P61803 113 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 RRAS2P62070 204 aaPredicted RBP5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 SLC38A11Q08AI6 406 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 TMEM88Q6PEY1 159 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF546Q86UE3 836 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 BAP18Q8IXM2 172 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC00612Q8N6U2 182 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 C15orf53Q8NAA6 179 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF738Q8NE65 137 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 MGST2Q99735 147 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 ARL6Q9H0F7 186 aa5.89□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC00854A0A1B0GVQ3 168 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 SMCO3A2RU48 225 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 CBY3A6NI87 242 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 PRSS29PA6NIE9 313 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 GOSR2O14653 212 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 LYRM1O43325 122 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 TCRBP04435 133 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF846Q147U1 533 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 MORN5Q5VZ52 161 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 LCN15Q6UWW0 184 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF493Q6ZR52 646 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC00299Q6ZSB3 139 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC00305Q7Z4B0 112 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 RNASE8Q8TDE3 154 aaKnown RBP5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 S100ZQ8WXG8 99 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 RPUSD4Q96CM3 377 aaKnown RBP5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 C20orf144Q9BQM9 153 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 SLC50A1Q9BRV3 221 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 TMEM208Q9BTX3 173 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 C20orf85Q9H1P6 137 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 DNAJC4Q9NNZ3 241 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 GSKIPQ9P0R6 139 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 MGAT4CQ9UBM8 478 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 WDR83OSQ9Y284 106 aa5.88□□□□□ -1.47
SMARCB1-207ENST00000491967 TRAV12-2A0A075B6T6 113 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 H3BQ15 152 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 MED14OSP0DP75 135 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 CDKN1BP46527 198 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 HIST1H1AQ02539 215 aaPredicted RBP5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 FGL1Q08830 312 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 OPCMLQ14982 345 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 BPIFA4PQ86YQ2 179 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF431Q8TF32 576 aaPredicted RBP5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 ODF3Q96PU9 254 aa5.87□□□□□ -1.47
SMARCB1-207ENST00000491967 PRAC2D3DTV9 90 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 H7BYZ3 331 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 M0R2N4 97 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 SLC17A3O00476 420 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF253O75346 499 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 SCGB1D2O95969 90 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 RPL29P47914 159 aaKnown RBP5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 FCN2Q15485 313 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 GUK1Q16774 197 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 C10orf113Q5VZT2 155 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNRF2Q8NHG8 242 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 TMEM263Q8WUH6 116 aaKnown RBP5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 C16orf74Q96GX8 76 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 C2orf50Q96LR7 162 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC01587Q99440 93 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 CCDC32Q9BV29 185 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 LYRM2Q9NU23 88 aaPredicted RBP5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 TIMM8BQ9Y5J9 83 aaPredicted RBP5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 PXMP4Q9Y6I8 212 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 DNAH11Q96DT5 4516 aa5.86□□□□□ -1.47
SMARCB1-207ENST00000491967 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 FAM24AA6NFZ4 105 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 NPIPB6E9PJ23 425 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 H3BNG1 76 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 CCSO14618 274 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 COX7A2P2O60397 106 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 ATP5G1P05496 136 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 DEFB130BP0DP73 79 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 DEFB130AP0DP74 79 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 HTN3P15516 51 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 S100A11P31949 105 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 ATP5G3P48201 142 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms