RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 HRH4Q9H3N8 390 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 RNF222A6NCQ9 220 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 G3V3Q6 166 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 HLA-DMBP28068 263 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 GUK1Q16774 197 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 CLUHP3Q96NS8 147 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
MSH5-SAPCD1-206ENST00000491552 H3BQ15 152 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 H3BTX0 84 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 IGKV3-20P01619 116 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 PSG3Q16557 428 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 SLC25A2Q9BXI2 301 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 AGRNO00468 2067 aa11.89□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 SLC17A3O00476 420 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 OR11H2Q8NH07 326 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 MUC7Q8TAX7 377 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 RARRES2Q99969 163 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 FUT9Q9Y231 359 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 SMLR1H3BR10 107 aa11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ZNF253O75346 499 aa11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 PYYP10082 97 aa11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 TRBV19A0A075B6N1 114 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 A0A0J9YWU9 116 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 A8MTW9 85 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 RHOBP62745 196 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 PSG9Q00887 426 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ACOT6Q3I5F7 207 aaPredicted RBP11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 HSD17B11Q8NBQ5 300 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 RPUSD4Q96CM3 377 aaKnown RBP11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 MFFQ9GZY8 342 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 STAB2Q8WWQ8 2551 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 C3orf84H3BNL1 204 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ARPC5O15511 151 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 M6PRP20645 277 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 FXYD7P58549 80 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 PDE6HQ13956 83 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 CSNK1G2-AS1Q8NCQ2 148 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 OR8A1Q8NGG7 326 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 PSMG3Q9BT73 122 aaPredicted RBP11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 SLC35B3Q9H1N7 401 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 NBEAL2Q6ZNJ1 2754 aa11.85□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 BORCS7-ASMTA0A0B4J1R7 106 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 OR7C2O60412 319 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ATP6V0CP27449 155 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 TAS2R45P59539 299 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 HIST1H1AQ02539 215 aaPredicted RBP11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 RPL7L1Q6DKI1 246 aaKnown RBP11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 OR2G3Q8NGZ4 309 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
MSH5-SAPCD1-206ENST00000491552 ZNF705FA8MVS1 300 aaPredicted RBP11.83□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 ZNF705EA8MWA4 302 aaPredicted RBP11.83□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 NDUFB4O95168 129 aa11.83□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 RAB2AP61019 212 aa11.83□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 Q6ZNX1 250 aa11.83□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 RNF141Q8WVD5 230 aa11.83□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPV4 95 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 TAAR5O14804 337 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 OR10J4P0C629 311 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 NBEAP1P0C6P0 100 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 FAM122CQ6P4D5 195 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 IL17DQ8TAD2 202 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 MRPL53Q96EL3 112 aaKnown RBP11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 ZNF503Q96F45 646 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 SH3BGRL3Q9H299 93 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 BOLA2-SMG1P6H3BVE0 249 aa11.81□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 AMBPP02760 352 aa11.81□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 MIFP14174 115 aa11.81□□□□□ -0.52
MSH5-SAPCD1-206ENST00000491552 UBE2L3P68036 154 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms