RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 A0A1B0GWB2 263 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 SMAD7O15105 426 aaKnown RBP7.88□□□□□ -1.15
ERCC3-208ENST00000491292 IGKV2D-40P01614 121 aaPredicted RBP7.88□□□□□ -1.15
ERCC3-208ENST00000491292 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 C1orf210Q8IVY1 113 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 C8orf49Q96NF6 230 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 ONECUT1Q9UBC0 465 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 TSSC4Q9Y5U2 329 aaPredicted RBP7.88□□□□□ -1.15
ERCC3-208ENST00000491292 NDUFA3O95167 84 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 IGHV1-46P01743 117 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 SCGB1D4Q6XE38 83 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 TMEM133Q9H2Q1 129 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 BDP1A6H8Y1 2624 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 CIDEAO60543 219 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 GLRXP35754 106 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 SLC25A48Q6ZT89 311 aaKnown RBP7.88□□□□□ -1.15
ERCC3-208ENST00000491292 RPRMLQ8N4K4 120 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 GAFA1Q96PS6 74 aa7.88□□□□□ -1.15
ERCC3-208ENST00000491292 AZU1P20160 251 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 ZNF418Q8TF45 676 aaPredicted RBP7.87□□□□□ -1.15
ERCC3-208ENST00000491292 RITA1Q96K30 269 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SLC25A39Q9BZJ4 359 aaPredicted RBP7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SIGLEC8Q9NYZ4 499 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 COL5A1P20908 1838 aaPredicted RBP7.87□□□□□ -1.15
ERCC3-208ENST00000491292 DSCAMO60469 2012 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 K7EP34 96 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
ERCC3-208ENST00000491292 JMJD8Q96S16 334 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 NDFIP1Q9BT67 221 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 MAP1LC3AQ9H492 121 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 OTORQ9NRC9 128 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SPG11Q96JI7 2443 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 C22orf46C9J442 243 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 LYNX1G3V0Z9 82 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 LYNX1P0DP58 116 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
ERCC3-208ENST00000491292 MDS2Q8NDY4 140 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 CEP192Q8TEP8 1941 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 IGKV3-7A0A075B6H7 116 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 H3BRM9 83 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SCGB1C2P0DMR2 95 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 CD40P25942 277 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 TMEM200BQ69YZ2 307 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SH2D6Q7Z4S9 175 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 C8orf46Q8TAG6 207 aa7.87□□□□□ -1.15
ERCC3-208ENST00000491292 SP9P0CG40 484 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 ATP5IP56385 69 aaPredicted RBP7.86□□□□□ -1.15
ERCC3-208ENST00000491292 LYPD2Q6UXB3 125 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 TMEM75Q8N9X5 138 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 NGBQ9NPG2 151 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 CUL9Q8IWT3 2517 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 ZFHX2Q9C0A1 2572 aaPredicted RBP7.86□□□□□ -1.15
ERCC3-208ENST00000491292 A0A1W2PPM0 123 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 ZC2HC1BQ5TFG8 222 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 OR4X2Q8NGF9 303 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 ZNF502Q8TBZ5 544 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 MYOZ3Q8TDC0 251 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 LINC00312Q9Y6C7 94 aa7.86□□□□□ -1.15
ERCC3-208ENST00000491292 FNDC10F2Z333 226 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 H3BMG7 143 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 H7C2G1 150 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 RPL11P62913 178 aaKnown RBP7.85□□□□□ -1.15
ERCC3-208ENST00000491292 OR5A1Q8NGJ0 315 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 ZNF479Q96JC4 524 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 ZNF71Q9NQZ8 489 aaPredicted RBP7.85□□□□□ -1.15
ERCC3-208ENST00000491292 A0A1B0GXF2 115 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 TMEM167AQ8TBQ9 72 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 A0A1B0GV72 72 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 MC5RP33032 325 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 RUSC1-AS1Q66K80 236 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 ARPC1AQ92747 370 aa7.85□□□□□ -1.15
ERCC3-208ENST00000491292 ARHGAP32A7KAX9 2087 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 COL4A2P08572 1712 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 NPYP01303 97 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 APOMO95445 188 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 LTAP01374 205 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 FXYD2P54710 66 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 OR9G4Q8NGQ1 327 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 CHAC1Q9BUX1 264 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 SLC25A15Q9Y619 301 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 CLEC3BP05452 202 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 S100A4P26447 101 aaKnown RBP7.84□□□□□ -1.15
ERCC3-208ENST00000491292 WFDC2Q14508 124 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 SPANXN1Q5VSR9 72 aa7.84□□□□□ -1.15
ERCC3-208ENST00000491292 SPAARA0A1B0GVQ0 90 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 C19orf67A6NJJ6 358 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 SH2D1AO60880 128 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
ERCC3-208ENST00000491292 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 TRAV40A0A0B4J280 105 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 HAX1O00165 279 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 TM4SF5O14894 197 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 LGALS7P47929 136 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
ERCC3-208ENST00000491292 C2orf91Q6ZV80 131 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 PPP1R27Q86WC6 154 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 IGKV1D-37A0A075B6S9 117 aa7.83□□□□□ -1.16
ERCC3-208ENST00000491292 TTC9CQ8N5M4 171 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms