RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 OPCMLQ14982 345 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 C10orf113Q5VZT2 155 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 MIC13Q5XKP0 118 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 Q6ZRG5 221 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 RNF182Q8N6D2 247 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.65
COL27A1-206ENST00000490831 UBE2L5PA0A1B0GUS4 154 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 MPDU1O75352 247 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
COL27A1-206ENST00000490831 FXYD7P58549 80 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 FGL1Q08830 312 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 MORN5Q5VZ52 161 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 LCN15Q6UWW0 184 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 BPIFA4PQ86YQ2 179 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 ZNF331Q9NQX6 463 aaPredicted RBP10.95□□□□□ -0.66
COL27A1-206ENST00000490831 OR5AC2Q9NZP5 309 aa10.95□□□□□ -0.66
COL27A1-206ENST00000490831 C11orf94C9JXX5 98 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 AMBPP02760 352 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 IGLC2P0DOY2 106 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 B2MP61769 119 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 NHLH2Q02577 135 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 BAXQ07812 192 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 PSG3Q16557 428 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 OR11H7Q8NGC8 314 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 PFDN5Q99471 154 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 SLC50A1Q9BRV3 221 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 SLC39A9Q9NUM3 307 aa10.94□□□□□ -0.66
COL27A1-206ENST00000490831 TMEM189A5PLL7 270 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 FGF7P21781 194 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 TCTAP57738 103 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 ZNF738Q8NE65 137 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 OR5C1Q8NGR4 320 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 PPP1R1CQ8WVI7 109 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 RNF126Q9BV68 326 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
COL27A1-206ENST00000490831 CRXO43186 299 aaPredicted RBP10.92□□□□□ -0.66
COL27A1-206ENST00000490831 SSNA1O43805 119 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 LRRC37A5PQ49AS3 106 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 OR8A1Q8NGG7 326 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 LRRC20Q8TCA0 184 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 C2CD4CQ8TF44 421 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 SAT2Q96F10 170 aaPredicted RBP10.92□□□□□ -0.66
COL27A1-206ENST00000490831 NPCDR1Q9BY65 106 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 GOLT1BQ9Y3E0 138 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
COL27A1-206ENST00000490831 H3BQ15 152 aa10.91□□□□□ -0.66
COL27A1-206ENST00000490831 MPC2O95563 127 aa10.91□□□□□ -0.66
COL27A1-206ENST00000490831 GUK1Q16774 197 aa10.91□□□□□ -0.66
COL27A1-206ENST00000490831 C12orf74Q32Q52 190 aa10.91□□□□□ -0.66
COL27A1-206ENST00000490831 Q6ZTC4 211 aa10.91□□□□□ -0.66
COL27A1-206ENST00000490831 RPUSD4Q96CM3 377 aaKnown RBP10.91□□□□□ -0.66
COL27A1-206ENST00000490831 TRAV10A0A0B4J240 114 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 TRAV5A0A0B4J249 113 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 BOLA2-SMG1P6H3BVE0 249 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 SLC17A3O00476 420 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 ZNF253O75346 499 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 PTTG1O95997 202 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 PET100P0DJ07 73 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
COL27A1-206ENST00000490831 IGHV3OR16-12A0A075B7B8 117 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 M0R2Z0 102 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 LY6G6CO95867 125 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 HBE1P02100 147 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 HIST1H1AQ02539 215 aaPredicted RBP10.89□□□□□ -0.67
COL27A1-206ENST00000490831 SPINK13Q1W4C9 94 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 THAP6Q8TBB0 222 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 WDR61Q9GZS3 305 aaKnown RBP10.89□□□□□ -0.67
COL27A1-206ENST00000490831 KMT2AQ03164 3969 aa10.89□□□□□ -0.67
COL27A1-206ENST00000490831 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 INSP01308 110 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 SNRPCP09234 159 aaKnown RBP10.88□□□□□ -0.67
COL27A1-206ENST00000490831 SPART-AS1P0CW21 52 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 CLINT1Q14677 625 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 ZNF586Q9NXT0 402 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 DKK2Q9UBU2 259 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 APLNQ9ULZ1 77 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 HSPB11Q9Y547 144 aa10.88□□□□□ -0.67
COL27A1-206ENST00000490831 TRBV19A0A075B6N1 114 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 LOC102723971A0A1B0GUV8 181 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 H3BTX0 84 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 PDE6HQ13956 83 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 RRN3P1Q2M238 152 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 BAP18Q8IXM2 172 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 ATP5SQ99766 215 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 KCNIP2Q9NS61 270 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 ALG5Q9Y673 324 aa10.87□□□□□ -0.67
COL27A1-206ENST00000490831 IGLL5B9A064 214 aa10.86□□□□□ -0.67
COL27A1-206ENST00000490831 HIST1H1EP10412 219 aaKnown RBP10.86□□□□□ -0.67
COL27A1-206ENST00000490831 RPL12P30050 165 aaKnown RBP10.86□□□□□ -0.67
COL27A1-206ENST00000490831 TSPOP30536 169 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms