RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 DAD1P61803 113 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 PSG3Q16557 428 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 TMEM88Q6PEY1 159 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 OR8A1Q8NGG7 326 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 ARV1Q9H2C2 271 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 GSKIPQ9P0R6 139 aa13.7□□□□□ -0.22
TNFRSF1B-202ENST00000489921 CENPXA8MT69 81 aa13.69□□□□□ -0.22
TNFRSF1B-202ENST00000489921 BOLA2-SMG1P6H3BVE0 249 aa13.69□□□□□ -0.22
TNFRSF1B-202ENST00000489921 INSP01308 110 aa13.69□□□□□ -0.22
TNFRSF1B-202ENST00000489921 TSPOP30536 169 aa13.69□□□□□ -0.22
TNFRSF1B-202ENST00000489921 CCSO14618 274 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 AGPAT2O15120 278 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 FCN2Q15485 313 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 RNF212Q495C1 297 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 MORN5Q5VZ52 161 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 TMEM37Q8WXS4 190 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 MGST2Q99735 147 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 C11orf1Q9H5F2 150 aa13.68□□□□□ -0.22
TNFRSF1B-202ENST00000489921 IGLV2-18A0A075B6J9 118 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 PRSS29PA6NIE9 313 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 LYRM9A8MSI8 78 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 HIST1H1AQ02539 215 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 CNPY1Q3B7I2 92 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 GGACTQ9BVM4 153 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 C20orf85Q9H1P6 137 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 ZNF331Q9NQX6 463 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 MGAT4CQ9UBM8 478 aa13.67□□□□□ -0.22
TNFRSF1B-202ENST00000489921 SNRPCP09234 159 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1B-202ENST00000489921 B2MP61769 119 aa13.66□□□□□ -0.22
TNFRSF1B-202ENST00000489921 PXDC1Q5TGL8 231 aa13.66□□□□□ -0.22
TNFRSF1B-202ENST00000489921 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
TNFRSF1B-202ENST00000489921 GOSR2O14653 212 aa13.65□□□□□ -0.22
TNFRSF1B-202ENST00000489921 RHOBP62745 196 aa13.65□□□□□ -0.22
TNFRSF1B-202ENST00000489921 KIR3DS1Q14943 382 aa13.65□□□□□ -0.22
TNFRSF1B-202ENST00000489921 ZNF546Q86UE3 836 aa13.65□□□□□ -0.22
TNFRSF1B-202ENST00000489921 UBE2DNLQ8IWF7 75 aa13.65□□□□□ -0.22
TNFRSF1B-202ENST00000489921 RPUSD4Q96CM3 377 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1B-202ENST00000489921 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
TNFRSF1B-202ENST00000489921 SLC17A3O00476 420 aa13.64□□□□□ -0.23
TNFRSF1B-202ENST00000489921 LYRM1O43325 122 aa13.64□□□□□ -0.23
TNFRSF1B-202ENST00000489921 TCRBP04435 133 aa13.64□□□□□ -0.23
TNFRSF1B-202ENST00000489921 CXCL2P19875 107 aa13.64□□□□□ -0.23
TNFRSF1B-202ENST00000489921 S100A7AQ86SG5 101 aa13.64□□□□□ -0.23
TNFRSF1B-202ENST00000489921 IGLC2P0DOY2 106 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 DEFB130BP0DP73 79 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 DEFB130AP0DP74 79 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 TAS2R60P59551 318 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 OPCMLQ14982 345 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 TMEM256Q8N2U0 113 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 LRRC20Q8TCA0 184 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 SAT2Q96F10 170 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 LINC01587Q99440 93 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 SEC22CQ9BRL7 303 aa13.63□□□□□ -0.23
TNFRSF1B-202ENST00000489921 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 H3BQ15 152 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 H3BTX0 84 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 CDKN1BP46527 198 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 IL15RAQ13261 267 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 LCN15Q6UWW0 184 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 C15orf53Q8NAA6 179 aa13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 PARD6GQ9BYG4 376 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1B-202ENST00000489921 RYR1P21817 5038 aa13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 FAM24AA6NFZ4 105 aa13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 CST7O76096 145 aa13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 BPIFA4PQ86YQ2 179 aa13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 RNASE8Q8TDE3 154 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 SLC50A1Q9BRV3 221 aa13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 LSM5Q9Y4Y9 91 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1B-202ENST00000489921 TRAV5A0A0B4J249 113 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 CBY3A6NI87 242 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 COX7A2P2O60397 106 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 VWC2Q2TAL6 325 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 C10orf113Q5VZT2 155 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 MIC13Q5XKP0 118 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 NRARPQ7Z6K4 114 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 DNAJC4Q9NNZ3 241 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 NUDT15Q9NV35 164 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 PPP1R14DQ9NXH3 145 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 WDR83OSQ9Y284 106 aa13.6□□□□□ -0.23
TNFRSF1B-202ENST00000489921 FAM25EA8MYX2 175 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 L7N2F9 121 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 HTN1P15515 57 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 CAMLGP49069 296 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 VAMP2P63027 116 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 C16orf74Q96GX8 76 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 C2orf50Q96LR7 162 aa13.59□□□□□ -0.23
TNFRSF1B-202ENST00000489921 F5H768 121 aa13.58□□□□□ -0.24
TNFRSF1B-202ENST00000489921 BCAP31P51572 246 aa13.58□□□□□ -0.24
TNFRSF1B-202ENST00000489921 FAM3BP58499 235 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ZNF846Q147U1 533 aa13.58□□□□□ -0.24
TNFRSF1B-202ENST00000489921 C12orf45Q8N5I9 185 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-202ENST00000489921 TIMM8BQ9Y5J9 83 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-202ENST00000489921 IGSF23A1L1A6 192 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 H7BYZ3 331 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 ATP5G1P05496 136 aa13.57□□□□□ -0.24
TNFRSF1B-202ENST00000489921 CT45A10P0DMU9 189 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms