RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 ODF3L2Q3SX64 289 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 SAT2Q96F10 170 aaPredicted RBP11.99□□□□□ -0.49
CLIC4-203ENST00000489758 PHYHIPLQ96FC7 376 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 PAXXQ9BUH6 204 aa11.99□□□□□ -0.49
CLIC4-203ENST00000489758 TRBV19A0A075B6N1 114 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 CTXND1A0A1B0GTU2 59 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 H3BTX0 84 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 SLC17A3O00476 420 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 OR7C2O60412 319 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 OR10J4P0C629 311 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 GUK1Q16774 197 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 DPPA3Q6W0C5 159 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 PQLC2Q6ZP29 291 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 RNF141Q8WVD5 230 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
CLIC4-203ENST00000489758 ISLRO14498 428 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 NDUFB4O95168 129 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 ZNF688P0C7X2 276 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 ARL14EPLP0DKL9 152 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 PSMB3P49720 205 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 SULT1A2P50226 295 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 FAM74A1Q5RGS3 127 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 SAMD13Q5VXD3 122 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 LCN15Q6UWW0 184 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 WFDC10AQ9H1F0 79 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 ZNF331Q9NQX6 463 aaPredicted RBP11.97□□□□□ -0.49
CLIC4-203ENST00000489758 UBQLN2Q9UHD9 624 aa11.97□□□□□ -0.49
CLIC4-203ENST00000489758 ZNF253O75346 499 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 NBEAP1P0C6P0 100 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 RAB5CP51148 216 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 UBE2L3P68036 154 aaKnown RBP11.96□□□□□ -0.49
CLIC4-203ENST00000489758 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 C16orf92Q96LL3 132 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 C20orf173Q96LM9 149 aa11.96□□□□□ -0.49
CLIC4-203ENST00000489758 K7EIL1 84 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 CXorf1O96002 111 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 GCHFRP30047 84 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 DEFB131AP59861 70 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 SNRPD3P62318 126 aaKnown RBP11.95□□□□□ -0.5
CLIC4-203ENST00000489758 PDE6HQ13956 83 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 PSMG4Q5JS54 123 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 ALKAL2Q6UX46 152 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 SLC50A1Q9BRV3 221 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 DNAH3Q8TD57 4116 aa11.95□□□□□ -0.5
CLIC4-203ENST00000489758 MAP1LC3B2A6NCE7 125 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 OR11H12B2RN74 326 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 ID1P41134 155 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
CLIC4-203ENST00000489758 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
CLIC4-203ENST00000489758 ZNF124Q15973 351 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 DEFB125Q8N687 156 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 MAP1LC3BQ9GZQ8 125 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 NOTCH1P46531 2555 aa11.94□□□□□ -0.5
CLIC4-203ENST00000489758 LRRC20Q8TCA0 184 aa11.93□□□□□ -0.5
CLIC4-203ENST00000489758 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
CLIC4-203ENST00000489758 DEFB1P60022 68 aa11.92□□□□□ -0.5
CLIC4-203ENST00000489758 TEX261Q6UWH6 196 aa11.92□□□□□ -0.5
CLIC4-203ENST00000489758 EXOC3-AS1Q8N2X6 119 aa11.92□□□□□ -0.5
CLIC4-203ENST00000489758 SFT2D1Q8WV19 159 aa11.92□□□□□ -0.5
CLIC4-203ENST00000489758 TMPRSS5Q9H3S3 457 aa11.92□□□□□ -0.5
CLIC4-203ENST00000489758 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
CLIC4-203ENST00000489758 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
CLIC4-203ENST00000489758 IGHV4-30-4P0DP06 118 aa11.91□□□□□ -0.5
CLIC4-203ENST00000489758 PSG9Q00887 426 aa11.91□□□□□ -0.5
CLIC4-203ENST00000489758 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
CLIC4-203ENST00000489758 KNCNA6PVL3 124 aa11.9□□□□□ -0.5
CLIC4-203ENST00000489758 A8MZ25 164 aa11.9□□□□□ -0.5
CLIC4-203ENST00000489758 RANP62826 216 aaKnown RBP11.9□□□□□ -0.5
CLIC4-203ENST00000489758 PSG3Q16557 428 aa11.9□□□□□ -0.5
CLIC4-203ENST00000489758 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
CLIC4-203ENST00000489758 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
CLIC4-203ENST00000489758 CLEC5AQ9NY25 188 aa11.9□□□□□ -0.5
CLIC4-203ENST00000489758 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
CLIC4-203ENST00000489758 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
CLIC4-203ENST00000489758 F6UB75 175 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 M0R3E3 92 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 PRB4P10163 310 aaPredicted RBP11.89□□□□□ -0.51
CLIC4-203ENST00000489758 ICAM4Q14773 271 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 GDF5OSQ5U4N7 250 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 ZNF738Q8NE65 137 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 ZNF680Q8NEM1 530 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
CLIC4-203ENST00000489758 Q9H3A6 140 aa11.89□□□□□ -0.51
CLIC4-203ENST00000489758 SAV1Q9H4B6 383 aaPredicted RBP11.89□□□□□ -0.51
CLIC4-203ENST00000489758 A0A1B0GV50 99 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 RBMY1BA6NDE4 496 aaKnown RBP11.88□□□□□ -0.51
CLIC4-203ENST00000489758 RBMY1EA6NEQ0 496 aaKnown RBP11.88□□□□□ -0.51
CLIC4-203ENST00000489758 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
CLIC4-203ENST00000489758 RBMY1DP0C7P1 496 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms