RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 BAXQ07812 192 aa12.85□□□□□ -0.35
ABCF3-217ENST00000489719 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
ABCF3-217ENST00000489719 TMEM37Q8WXS4 190 aa12.85□□□□□ -0.35
ABCF3-217ENST00000489719 PPP1R14DQ9NXH3 145 aa12.85□□□□□ -0.35
ABCF3-217ENST00000489719 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
ABCF3-217ENST00000489719 AMBPP02760 352 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 CXCL3P19876 107 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 EMP1P54849 157 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 PSG3Q16557 428 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 VWC2Q2TAL6 325 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 MIC13Q5XKP0 118 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 Q6ZTC4 211 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 TMEM208Q9BTX3 173 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 NMES1Q9C002 83 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 SLC25A31Q9H0C2 315 aa12.84□□□□□ -0.35
ABCF3-217ENST00000489719 UBE2L5PA0A1B0GUS4 154 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 A8MTW9 85 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 HBE1P02100 147 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
ABCF3-217ENST00000489719 RHOBP62745 196 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 C12orf74Q32Q52 190 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 LGALS9CQ6DKI2 356 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 LCN15Q6UWW0 184 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 IGF2BP2-AS1Q96M15 143 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 PFDN5Q99471 154 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
ABCF3-217ENST00000489719 E5RGE8 158 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 MRPS12O15235 138 aaKnown RBP12.82□□□□□ -0.36
ABCF3-217ENST00000489719 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
ABCF3-217ENST00000489719 CXCL2P19875 107 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 FGF7P21781 194 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 B2MP61769 119 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 PRR20EP86478 221 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 PRR20CP86479 221 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 PRR20DP86480 221 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 PRR20BP86481 221 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 PRR20AP86496 221 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 HIST1H1AQ02539 215 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-217ENST00000489719 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 OR11H7Q8NGC8 314 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 OR8A1Q8NGG7 326 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 SLC50A1Q9BRV3 221 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 SLC39A9Q9NUM3 307 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 CELA1Q9UNI1 258 aa12.82□□□□□ -0.36
ABCF3-217ENST00000489719 SSNA1O43805 119 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 MPDU1O75352 247 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 NHLH2Q02577 135 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 OPCMLQ14982 345 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 RRN3P1Q2M238 152 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 CHAC2Q8WUX2 184 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 RPUSD4Q96CM3 377 aaKnown RBP12.81□□□□□ -0.36
ABCF3-217ENST00000489719 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
ABCF3-217ENST00000489719 DEFB131BA0A096LNP1 70 aa12.8□□□□□ -0.36
ABCF3-217ENST00000489719 M0R2Z0 102 aa12.8□□□□□ -0.36
ABCF3-217ENST00000489719 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
ABCF3-217ENST00000489719 ZNF331Q9NQX6 463 aaPredicted RBP12.8□□□□□ -0.36
ABCF3-217ENST00000489719 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
ABCF3-217ENST00000489719 HYDINQ4G0P3 5121 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 TRAV5A0A0B4J249 113 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 INSP01308 110 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 GUK1Q16774 197 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 OR5C1Q8NGR4 320 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 APLNQ9ULZ1 77 aa12.79□□□□□ -0.36
ABCF3-217ENST00000489719 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
ABCF3-217ENST00000489719 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
ABCF3-217ENST00000489719 H3BTX0 84 aa12.78□□□□□ -0.36
ABCF3-217ENST00000489719 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
ABCF3-217ENST00000489719 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 H3BQ15 152 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 BOLA2-SMG1P6H3BVE0 249 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 IGLC2P0DOY2 106 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 PPP1R1CQ8WVI7 109 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 DKK2Q9UBU2 259 aa12.77□□□□□ -0.37
ABCF3-217ENST00000489719 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 H0YIZ8 118 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 CRXO43186 299 aaPredicted RBP12.76□□□□□ -0.37
ABCF3-217ENST00000489719 PRB4P10163 310 aaPredicted RBP12.76□□□□□ -0.37
ABCF3-217ENST00000489719 H2BFSP57053 126 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 CLINT1Q14677 625 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 SAT2Q96F10 170 aaPredicted RBP12.76□□□□□ -0.37
ABCF3-217ENST00000489719 LINC01587Q99440 93 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 NPCDR1Q9BY65 106 aa12.76□□□□□ -0.37
ABCF3-217ENST00000489719 YTHDF2Q9Y5A9 579 aaKnown RBP12.76□□□□□ -0.37
ABCF3-217ENST00000489719 ZNF705GA8MUZ8 300 aaPredicted RBP12.75□□□□□ -0.37
ABCF3-217ENST00000489719 PET100P0DJ07 73 aa12.75□□□□□ -0.37
ABCF3-217ENST00000489719 BAP18Q8IXM2 172 aa12.75□□□□□ -0.37
ABCF3-217ENST00000489719 SLC17A3O00476 420 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 TSPOP30536 169 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 CDKN1BP46527 198 aa12.74□□□□□ -0.37
ABCF3-217ENST00000489719 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms