RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TCEAL7Q9BRU2 100 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 SMPXQ9UHP9 88 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 SMAD5-AS1Q9Y6J3 95 aa10.78□□□□□ -0.68
VPS26A-205ENST00000489656 GGTLC3B5MD39 225 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 NDUFB4O95168 129 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 SLURP1P55000 103 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 BLNKQ8WV28 456 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 C17orf77Q96MU5 243 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 SEC11CQ9BY50 192 aa10.77□□□□□ -0.69
VPS26A-205ENST00000489656 CCL24O00175 119 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 CHEK1O14757 476 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
VPS26A-205ENST00000489656 SIGLEC15Q6ZMC9 328 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 C11orf52Q96A22 123 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 LINC00052Q96N35 136 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 RHPN1-AS1Q9BWJ2 59 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 OTORQ9NRC9 128 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 PEMTQ9UBM1 199 aa10.76□□□□□ -0.69
VPS26A-205ENST00000489656 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 IGHV3-66A0A0C4DH42 116 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 A0A1W2PRX2 142 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 HELTA6NFD8 242 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 ADCYAP1P18509 176 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 PSG9Q00887 426 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 AWAT1Q58HT5 328 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 FAM90A2PQ658T7 463 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 HIST2H2BDQ6DRA6 164 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 Q9H3A6 140 aa10.75□□□□□ -0.69
VPS26A-205ENST00000489656 CARHSP1Q9Y2V2 147 aaKnown RBP10.75□□□□□ -0.69
VPS26A-205ENST00000489656 F8W036 122 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 RANP62826 216 aaKnown RBP10.74□□□□□ -0.69
VPS26A-205ENST00000489656 SUMO1P63165 101 aaKnown RBP10.74□□□□□ -0.69
VPS26A-205ENST00000489656 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 C5orf17Q8NAS9 161 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 DLX4Q92988 240 aaPredicted RBP10.74□□□□□ -0.69
VPS26A-205ENST00000489656 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 CITED1Q99966 193 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 SLC50A1Q9BRV3 221 aa10.74□□□□□ -0.69
VPS26A-205ENST00000489656 PGPA6NDG6 321 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 ZNF785A8K8V0 405 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 H3BTX0 84 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 SLC17A3O00476 420 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 SNRPCP09234 159 aaKnown RBP10.73□□□□□ -0.69
VPS26A-205ENST00000489656 CBLN1P23435 193 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 KRTAP24-1Q3LI83 254 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 FAM74A3Q4VXF1 159 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 PRIMA1Q86XR5 153 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
VPS26A-205ENST00000489656 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
VPS26A-205ENST00000489656 ZNF331Q9NQX6 463 aaPredicted RBP10.73□□□□□ -0.69
VPS26A-205ENST00000489656 SCO2A0A1W2PP80 73 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 M0QZ24 198 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 FOLR2P14207 255 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 EDN2P20800 178 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 C2CD4CQ8TF44 421 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 AAMDCQ9H7C9 122 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 SIGLEC8Q9NYZ4 499 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 EPDR1Q9UM22 224 aa10.72□□□□□ -0.69
VPS26A-205ENST00000489656 ATRQ13535 2644 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 SLC25A5P05141 298 aaKnown RBP10.71□□□□□ -0.69
VPS26A-205ENST00000489656 CSN3P07498 182 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 NSUN5P1Q3KNT7 163 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 TCF24Q7RTU0 167 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 EXOC3-AS1Q8N2X6 119 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 PARLQ9H300 379 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 NRN1Q9NPD7 142 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 TENM1Q9UKZ4 2725 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 PRELID1Q9Y255 219 aa10.71□□□□□ -0.69
VPS26A-205ENST00000489656 PEX7O00628 323 aa10.7□□□□□ -0.7
VPS26A-205ENST00000489656 SOCS3O14543 225 aa10.7□□□□□ -0.7
VPS26A-205ENST00000489656 OVOL1O14753 267 aa10.7□□□□□ -0.7
VPS26A-205ENST00000489656 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
VPS26A-205ENST00000489656 ATG101Q9BSB4 218 aa10.7□□□□□ -0.7
VPS26A-205ENST00000489656 MLXQ9UH92 298 aa10.7□□□□□ -0.7
VPS26A-205ENST00000489656 SERTM2A0A1B0GWG4 89 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 ZNF727A8MUV8 499 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 TCRAP04437 139 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 CEBPGP53567 150 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 KLF12Q9Y4X4 402 aa10.69□□□□□ -0.7
VPS26A-205ENST00000489656 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 A6NJY4 79 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 C9JCJ5 164 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 ISLRO14498 428 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 APOC3P02656 99 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
VPS26A-205ENST00000489656 AKR1C3P42330 323 aa10.68□□□□□ -0.7
VPS26A-205ENST00000489656 TAS2R60P59551 318 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms