RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 GP9P14770 177 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 S100A7P31151 101 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 RPL15P61313 204 aaKnown RBP5.94□□□□□ -1.46
SMC6-209ENST00000489535 SOHLH1Q5JUK2 328 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 FAM209BQ5JX69 171 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 KLHDC1Q8N7A1 406 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 STXBP6Q8NFX7 210 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 SUN5Q8TC36 379 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 BLNKQ8WV28 456 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 FXYD5Q96DB9 178 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 OR5B12Q96R08 314 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 TXNDC17Q9BRA2 123 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 CARHSP1Q9Y2V2 147 aaKnown RBP5.94□□□□□ -1.46
SMC6-209ENST00000489535 YTHDF2Q9Y5A9 579 aaKnown RBP5.94□□□□□ -1.46
SMC6-209ENST00000489535 ARL2-SNX15V9GYD0 113 aa5.94□□□□□ -1.46
SMC6-209ENST00000489535 F6UZH7 168 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 NDUFA4O00483 81 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 ZNF207O43670 478 aaKnown RBP5.93□□□□□ -1.46
SMC6-209ENST00000489535 NDUFS6O75380 124 aaKnown RBP5.93□□□□□ -1.46
SMC6-209ENST00000489535 GUCA2BQ16661 112 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 ZNF674Q2M3X9 581 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 FAM90A2PQ658T7 463 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 BPIFA4PQ86YQ2 179 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 CCDC28AQ8IWP9 274 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 MYOZ3Q8TDC0 251 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 C20orf24Q9BUV8 137 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 TMEM14CQ9P0S9 112 aa5.93□□□□□ -1.46
SMC6-209ENST00000489535 PEF1Q9UBV8 284 aaKnown RBP5.93□□□□□ -1.46
SMC6-209ENST00000489535 HIVEP2P31629 2446 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 A0A1W2PRE2 83 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 CLPSL1A2RUU4 121 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 GGTLC3B5MD39 225 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 TMEM250H0YL14 139 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 H3BTX0 84 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 PDE6DO43924 150 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 GGCTO75223 188 aaKnown RBP5.92□□□□□ -1.46
SMC6-209ENST00000489535 SNAPINO95295 136 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 LGALS1P09382 135 aaKnown RBP5.92□□□□□ -1.46
SMC6-209ENST00000489535 NBEAP1P0C6P0 100 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 HIST1H1EP10412 219 aaKnown RBP5.92□□□□□ -1.46
SMC6-209ENST00000489535 SVBPQ8N300 66 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 RNF152Q8N8N0 203 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 OR4F17Q8NGA8 305 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 RPUSD4Q96CM3 377 aaKnown RBP5.92□□□□□ -1.46
SMC6-209ENST00000489535 UBE2E2Q96LR5 201 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 METTL26Q96S19 204 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 PARLQ9H300 379 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 C16orf95Q9H693 158 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 ZNF586Q9NXT0 402 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 RNF24Q9Y225 148 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 BAHCC1Q9P281 2608 aa5.92□□□□□ -1.46
SMC6-209ENST00000489535 IGHV3-49A0A0A0MS15 119 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 ZNF727A8MUV8 499 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 H3BQ15 152 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 M0R036 132 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 MRPS12O15235 138 aaKnown RBP5.91□□□□□ -1.46
SMC6-209ENST00000489535 TCF21O43680 179 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 SCO1O75880 301 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 IGLC2P0DOY2 106 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 RPL7P18124 248 aaKnown RBP5.91□□□□□ -1.46
SMC6-209ENST00000489535 NPPCP23582 126 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 RANP62826 216 aaKnown RBP5.91□□□□□ -1.46
SMC6-209ENST00000489535 SUMO1P63165 101 aaKnown RBP5.91□□□□□ -1.46
SMC6-209ENST00000489535 RPEL1Q2QD12 228 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 ATRAIDQ6UW56 229 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 UNQ9165/PRO28630Q6UXU0 137 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 OR8I2Q8N0Y5 310 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 TMEM190Q8WZ59 177 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 SMIM7Q9BQ49 75 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 NKX6-2Q9C056 277 aaPredicted RBP5.91□□□□□ -1.46
SMC6-209ENST00000489535 Q9H3A6 140 aa5.91□□□□□ -1.46
SMC6-209ENST00000489535 IGHV4OR15-8A0A075B7B6 117 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 IGHV3OR16-13A0A075B7E8 117 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 A0A087WW49 117 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 IGHV3-74A0A0B4J1X5 117 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 IGHV3-66A0A0C4DH42 116 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 ZNF320A2RRD8 509 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 PGPA6NDG6 321 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 BUB3O43684 328 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 CRLF1O75462 422 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 NDUFB4O95168 129 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 NDUFA7O95182 113 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 APOHP02749 345 aaPredicted RBP5.9□□□□□ -1.46
SMC6-209ENST00000489535 SLC25A5P05141 298 aaKnown RBP5.9□□□□□ -1.46
SMC6-209ENST00000489535 CRYBB3P26998 211 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 BEAN1Q3B7T3 259 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 FAM106AQ4KMX7 169 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 FAM74A3Q4VXF1 159 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 AWAT1Q58HT5 328 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 C18orf65Q6ZTR6 163 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 LINC01006Q8NI28 216 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 C11orf52Q96A22 123 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 TVP23CQ96ET8 276 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 C17orf77Q96MU5 243 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 GPR82Q96P67 336 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 NIPSNAP3BQ9BS92 247 aa5.9□□□□□ -1.46
SMC6-209ENST00000489535 DERL1Q9BUN8 251 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms