RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 NPCDR1Q9BY65 106 aa9.74□□□□□ -0.85
CCL28-202ENST00000489442 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
CCL28-202ENST00000489442 TRAV8-2A0A0B4J237 113 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
CCL28-202ENST00000489442 LCN15Q6UWW0 184 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 CSNK1G2-AS1Q8NCQ2 148 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 PPP1R14DQ9NXH3 145 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 MBD2Q9UBB5 411 aa9.73□□□□□ -0.85
CCL28-202ENST00000489442 IGHV3OR16-12A0A075B7B8 117 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 TRAV5A0A0B4J249 113 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 ZNF705EA8MWA4 302 aaPredicted RBP9.72□□□□□ -0.85
CCL28-202ENST00000489442 C17orf112F2Z3M2 114 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 IFNA5P01569 189 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 CXCL2P19875 107 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 CXCL3P19876 107 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 PSG3Q16557 428 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 RGS21Q2M5E4 152 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 MORN5Q5VZ52 161 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 ATP5SQ99766 215 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 SLC50A1Q9BRV3 221 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 MFFQ9GZY8 342 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 SLC35B3Q9H1N7 401 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 HSPB11Q9Y547 144 aa9.72□□□□□ -0.85
CCL28-202ENST00000489442 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 NUPR2A6NF83 97 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 H3BTX0 84 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 MRPS12O15235 138 aaKnown RBP9.71□□□□□ -0.86
CCL28-202ENST00000489442 ZNF705DP0CH99 300 aaPredicted RBP9.71□□□□□ -0.86
CCL28-202ENST00000489442 ZNF705BP0CI00 300 aaPredicted RBP9.71□□□□□ -0.86
CCL28-202ENST00000489442 HLA-DMBP28068 263 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
CCL28-202ENST00000489442 RHOBP62745 196 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 FCN2Q15485 313 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 Q8NAQ8 132 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 SCGB1C1Q8TD33 95 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 SMIM3Q9BZL3 60 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.86
CCL28-202ENST00000489442 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
CCL28-202ENST00000489442 JTBO76095 146 aa9.7□□□□□ -0.86
CCL28-202ENST00000489442 NANOS2P60321 138 aaKnown RBP9.7□□□□□ -0.86
CCL28-202ENST00000489442 HIST1H1AQ02539 215 aaPredicted RBP9.7□□□□□ -0.86
CCL28-202ENST00000489442 GUK1Q16774 197 aa9.7□□□□□ -0.86
CCL28-202ENST00000489442 RPUSD4Q96CM3 377 aaKnown RBP9.7□□□□□ -0.86
CCL28-202ENST00000489442 TMEM208Q9BTX3 173 aa9.7□□□□□ -0.86
CCL28-202ENST00000489442 ZNF331Q9NQX6 463 aaPredicted RBP9.7□□□□□ -0.86
CCL28-202ENST00000489442 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
CCL28-202ENST00000489442 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
CCL28-202ENST00000489442 X6R8D5 127 aa9.7□□□□□ -0.86
CCL28-202ENST00000489442 H3BQ15 152 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 AMBPP02760 352 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 RBMY1A1P0DJD3 496 aaKnown RBP9.69□□□□□ -0.86
CCL28-202ENST00000489442 RBMY1CP0DJD4 496 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 IGLC2P0DOY2 106 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 RBMY1FQ15415 496 aaKnown RBP9.69□□□□□ -0.86
CCL28-202ENST00000489442 GCSAMLQ5JQS6 135 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
CCL28-202ENST00000489442 OR11H7Q8NGC8 314 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 OR8A1Q8NGG7 326 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 PHLDA1Q8WV24 401 aaPredicted RBP9.69□□□□□ -0.86
CCL28-202ENST00000489442 LYSTQ99698 3801 aa9.69□□□□□ -0.86
CCL28-202ENST00000489442 DYNC2H1Q8NCM8 4307 aaKnown RBP9.68□□□□□ -0.86
CCL28-202ENST00000489442 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
CCL28-202ENST00000489442 SLC17A3O00476 420 aa9.68□□□□□ -0.86
CCL28-202ENST00000489442 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
CCL28-202ENST00000489442 ZNF705AQ6ZN79 300 aaPredicted RBP9.68□□□□□ -0.86
CCL28-202ENST00000489442 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
CCL28-202ENST00000489442 TIMM9Q9Y5J7 89 aa9.68□□□□□ -0.86
CCL28-202ENST00000489442 LCE6AA0A183 80 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 ZNF705FA8MVS1 300 aaPredicted RBP9.67□□□□□ -0.86
CCL28-202ENST00000489442 M0R2Z0 102 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 PRB4P10163 310 aaPredicted RBP9.67□□□□□ -0.86
CCL28-202ENST00000489442 HIST1H1EP10412 219 aaKnown RBP9.67□□□□□ -0.86
CCL28-202ENST00000489442 FFAR4Q5NUL3 377 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 AMTNQ6UX39 209 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 BLNKQ8WV28 456 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 SAT2Q96F10 170 aaPredicted RBP9.67□□□□□ -0.86
CCL28-202ENST00000489442 IGF2BP2-AS1Q96M15 143 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 NEU1Q99519 415 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 ZNF586Q9NXT0 402 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 TMEM14CQ9P0S9 112 aa9.67□□□□□ -0.86
CCL28-202ENST00000489442 A8MTW9 85 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 INSP01308 110 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 HBE1P02100 147 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 GIPP09681 153 aaPredicted RBP9.66□□□□□ -0.86
CCL28-202ENST00000489442 PYYP10082 97 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 EMP1P54849 157 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 MIR17HGQ75NE6 70 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 ASB13Q8WXK3 278 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
CCL28-202ENST00000489442 RFNGQ9Y644 331 aa9.66□□□□□ -0.86
CCL28-202ENST00000489442 TRBV19A0A075B6N1 114 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 TMEM189A5PLL7 270 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 BOLA2-SMG1P6H3BVE0 249 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 ZNF253O75346 499 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 RYR3Q15413 4870 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 RRN3P1Q2M238 152 aa9.65□□□□□ -0.86
CCL28-202ENST00000489442 INO80EQ8NBZ0 244 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms