RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TRAV8-6A0A0B4J262 113 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 NOTOA8MTQ0 251 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 ORM1P02763 201 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 HRH1P35367 487 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 PPT1P50897 306 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 ZNF846Q147U1 533 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 NOXA1Q86UR1 476 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 LRRC20Q8TCA0 184 aa9.66□□□□□ -0.86
UFD1-209ENST00000489406 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.66□□□□□ -0.86
UFD1-209ENST00000489406 GABARAPH6UMI1 98 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 GABARAPO95166 117 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 TCL1AP56279 114 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 TAS2R46P59540 309 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 NMSQ5H8A3 153 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 OR10J3Q5JRS4 329 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 STEAP1BQ6NZ63 245 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 FAM219AQ8IW50 185 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 OR5H6Q8NGV6 325 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 SLC25A38Q96DW6 304 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 SLC35E1Q96K37 410 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 MGLLQ99685 303 aa9.65□□□□□ -0.86
UFD1-209ENST00000489406 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 ORM2P19652 201 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 TSPAN5P62079 268 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 SP6Q3SY56 376 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 AARDQ4LEZ3 155 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 C22orf42Q6IC83 251 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
UFD1-209ENST00000489406 ZNF479Q96JC4 524 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
UFD1-209ENST00000489406 TRAV8-3A0A0A6YYJ7 113 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 NAT1P18440 290 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 TIRAPP58753 221 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 FFAR4Q5NUL3 377 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 C10orf67Q8IYJ2 551 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 NHLRC2Q8NBF2 726 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 TRGV9Q99603 122 aa9.63□□□□□ -0.87
UFD1-209ENST00000489406 LINC00854A0A1B0GVQ3 168 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 PGAM2P15259 253 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 PI3P19957 117 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 HLA-DMAP28067 261 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
UFD1-209ENST00000489406 TEPPQ6URK8 271 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 IQCF2Q8IXL9 164 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 Q8N3U1 123 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 EIF4E3Q8N5X7 224 aaKnown RBP9.62□□□□□ -0.87
UFD1-209ENST00000489406 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 ANAPC10Q9UM13 185 aa9.62□□□□□ -0.87
UFD1-209ENST00000489406 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
UFD1-209ENST00000489406 IGKV1OR2-108A0A075B7D4 117 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 A0A0A6YYH2 397 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 C3orf85A0A1B0GTC6 90 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 TRDV1A0A1B0GX56 115 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 A6NJ64 397 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 PRAC2D3DTV9 90 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 CT45A10P0DMU9 189 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
UFD1-209ENST00000489406 LEPP41159 167 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 UCP3P55916 312 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 ANXA2RQ3ZCQ2 193 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 GGNBP1Q5YKI7 109 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 LYSMD2Q8IV50 215 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 ZBTB8BQ8NAP8 495 aaPredicted RBP9.61□□□□□ -0.87
UFD1-209ENST00000489406 S100A14Q9HCY8 104 aa9.61□□□□□ -0.87
UFD1-209ENST00000489406 CRYM-AS1A6NIL9 109 aa9.6□□□□□ -0.87
UFD1-209ENST00000489406 PANO1I0J062 215 aa9.6□□□□□ -0.87
UFD1-209ENST00000489406 CFDP00746 253 aaPredicted RBP9.6□□□□□ -0.87
UFD1-209ENST00000489406 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
UFD1-209ENST00000489406 SCN3BQ9NY72 215 aa9.6□□□□□ -0.87
UFD1-209ENST00000489406 TP53TG3Q9ULZ0 132 aa9.6□□□□□ -0.87
UFD1-209ENST00000489406 PIGPP57054 158 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 RND3P61587 244 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 TMEM182Q6ZP80 229 aaPredicted RBP9.59□□□□□ -0.87
UFD1-209ENST00000489406 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 LGI3Q8N145 548 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 U3KQ87 197 aa9.59□□□□□ -0.87
UFD1-209ENST00000489406 H3BRN7 92 aa9.58□□□□□ -0.88
UFD1-209ENST00000489406 MEF2DQ14814 521 aa9.58□□□□□ -0.88
UFD1-209ENST00000489406 IBA57Q5T440 356 aaKnown RBP9.58□□□□□ -0.88
UFD1-209ENST00000489406 A0A087X0K7 114 aa9.57□□□□□ -0.88
UFD1-209ENST00000489406 C7orf71A4D174 169 aa9.57□□□□□ -0.88
UFD1-209ENST00000489406 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
UFD1-209ENST00000489406 S100A7P31151 101 aa9.57□□□□□ -0.88
UFD1-209ENST00000489406 WDR73Q6P4I2 378 aa9.57□□□□□ -0.88
UFD1-209ENST00000489406 DAZ4Q86SG3 579 aaKnown RBP9.57□□□□□ -0.88
UFD1-209ENST00000489406 BPIFCQ8NFQ6 507 aa9.57□□□□□ -0.88
UFD1-209ENST00000489406 DAZ3Q9NR90 486 aaKnown RBP9.57□□□□□ -0.88
UFD1-209ENST00000489406 RGS10O43665 173 aa9.56□□□□□ -0.88
UFD1-209ENST00000489406 SLC25A5P05141 298 aaKnown RBP9.56□□□□□ -0.88
UFD1-209ENST00000489406 OR10P1Q8NGE3 313 aa9.56□□□□□ -0.88
UFD1-209ENST00000489406 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
UFD1-209ENST00000489406 NDUFB11Q9NX14 153 aa9.56□□□□□ -0.88
UFD1-209ENST00000489406 IGKV2D-24A0A075B6R9 120 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
UFD1-209ENST00000489406 RCVRNP35243 200 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms