RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 CXCL3P19876 107 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 CNN1P51911 297 aaKnown RBP15.24■□□□□ 0.03
LIME1-207ENST00000489212 BAXQ07812 192 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 OPCMLQ14982 345 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 C10orf113Q5VZT2 155 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 DNAJC4Q9NNZ3 241 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 CELA1Q9UNI1 258 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 KMT2AQ03164 3969 aa15.24■□□□□ 0.03
LIME1-207ENST00000489212 E5RGE8 158 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 PRB4P10163 310 aaPredicted RBP15.23■□□□□ 0.03
LIME1-207ENST00000489212 FGF7P21781 194 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 RPL29P47914 159 aaKnown RBP15.23■□□□□ 0.03
LIME1-207ENST00000489212 ATP6V1FQ16864 119 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 Q6ZRG5 221 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 ZNF738Q8NE65 137 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 NEU1Q99519 415 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 SLC39A9Q9NUM3 307 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 RNF24Q9Y225 148 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 VPS13DQ5THJ4 4388 aa15.23■□□□□ 0.03
LIME1-207ENST00000489212 IGHV3OR16-12A0A075B7B8 117 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 TRAV5A0A0B4J249 113 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 RLN2P04090 185 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 B2MP61769 119 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 CYCSP99999 105 aaKnown RBP15.22■□□□□ 0.03
LIME1-207ENST00000489212 BPIFA4PQ86YQ2 179 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 C1orf158Q8N1D5 194 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 OR11H7Q8NGC8 314 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 CHAC2Q8WUX2 184 aa15.22■□□□□ 0.03
LIME1-207ENST00000489212 H3BTX0 84 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 SSNA1O43805 119 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 DUSP14O95147 198 aaKnown RBP15.21■□□□□ 0.03
LIME1-207ENST00000489212 PSG3Q16557 428 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 Q6ZTC4 211 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 OR5C1Q8NGR4 320 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 LRRC20Q8TCA0 184 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 PPP1R1CQ8WVI7 109 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 PXMP4Q9Y6I8 212 aa15.21■□□□□ 0.03
LIME1-207ENST00000489212 SLC17A3O00476 420 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 LY6G6CO95867 125 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 IGLC2P0DOY2 106 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 CXCL2P19875 107 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 LCN15Q6UWW0 184 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 OR1L4Q8NGR5 311 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 RNF126Q9BV68 326 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 NPCDR1Q9BY65 106 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 SLC25A31Q9H0C2 315 aa15.2■□□□□ 0.02
LIME1-207ENST00000489212 ZNF331Q9NQX6 463 aaPredicted RBP15.2■□□□□ 0.02
LIME1-207ENST00000489212 H3BQ15 152 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 M0R2Z0 102 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 SPINK13Q1W4C9 94 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 C12orf74Q32Q52 190 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 ZNF767PQ75MW2 155 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 OR8A1Q8NGG7 326 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 THAP6Q8TBB0 222 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 PFDN5Q99471 154 aa15.19■□□□□ 0.02
LIME1-207ENST00000489212 SMIM9A6NGZ8 99 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 CRXO43186 299 aaPredicted RBP15.18■□□□□ 0.02
LIME1-207ENST00000489212 MPDU1O75352 247 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 HIST1H1AQ02539 215 aaPredicted RBP15.18■□□□□ 0.02
LIME1-207ENST00000489212 CLINT1Q14677 625 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 GCSAMLQ5JQS6 135 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 C2CD4CQ8TF44 421 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 RPUSD4Q96CM3 377 aaKnown RBP15.18■□□□□ 0.02
LIME1-207ENST00000489212 IGF2BP2-AS1Q96M15 143 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 GOLT1BQ9Y3E0 138 aa15.18■□□□□ 0.02
LIME1-207ENST00000489212 EPPK1P58107 5090 aaKnown RBP15.18■□□□□ 0.02
LIME1-207ENST00000489212 C11orf94C9JXX5 98 aa15.17■□□□□ 0.02
LIME1-207ENST00000489212 MPC2O95563 127 aa15.17■□□□□ 0.02
LIME1-207ENST00000489212 SAT2Q96F10 170 aaPredicted RBP15.17■□□□□ 0.02
LIME1-207ENST00000489212 SLC50A1Q9BRV3 221 aa15.17■□□□□ 0.02
LIME1-207ENST00000489212 RFNGQ9Y644 331 aa15.17■□□□□ 0.02
LIME1-207ENST00000489212 EMP1P54849 157 aa15.16■□□□□ 0.02
LIME1-207ENST00000489212 ALG5Q9Y673 324 aa15.16■□□□□ 0.02
LIME1-207ENST00000489212 PRAC2D3DTV9 90 aa15.15■□□□□ 0.02
LIME1-207ENST00000489212 AMBPP02760 352 aa15.15■□□□□ 0.02
LIME1-207ENST00000489212 BAP18Q8IXM2 172 aa15.15■□□□□ 0.02
LIME1-207ENST00000489212 ZNF586Q9NXT0 402 aa15.15■□□□□ 0.02
LIME1-207ENST00000489212 TRAV12-2A0A075B6T6 113 aa15.14■□□□□ 0.01
LIME1-207ENST00000489212 TRAV10A0A0B4J240 114 aa15.14■□□□□ 0.01
LIME1-207ENST00000489212 IGLL5B9A064 214 aa15.14■□□□□ 0.01
LIME1-207ENST00000489212 BOLA2-SMG1P6H3BVE0 249 aa15.14■□□□□ 0.01
LIME1-207ENST00000489212 PRM2P04554 102 aa15.14■□□□□ 0.01
LIME1-207ENST00000489212 RHOBP62745 196 aa15.14■□□□□ 0.01
LIME1-207ENST00000489212 WDR61Q9GZS3 305 aaKnown RBP15.14■□□□□ 0.01
LIME1-207ENST00000489212 TMEM189A5PLL7 270 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 INSP01308 110 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 HBE1P02100 147 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 MBD2Q9UBB5 411 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 APLNQ9ULZ1 77 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 HSPB11Q9Y547 144 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 DNAH6Q9C0G6 4158 aa15.13■□□□□ 0.01
LIME1-207ENST00000489212 LOC102723971A0A1B0GUV8 181 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 PTTG1O95997 202 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 SPART-AS1P0CW21 52 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 GUK1Q16774 197 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 RRN3P1Q2M238 152 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 LGALS9CQ6DKI2 356 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 TMEM208Q9BTX3 173 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 TMEM14CQ9P0S9 112 aa15.12■□□□□ 0.01
LIME1-207ENST00000489212 DKK2Q9UBU2 259 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms