RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 C17orf77Q96MU5 243 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
BRCA1-218ENST00000489037 KMT2CQ8NEZ4 4911 aaKnown RBP10.37□□□□□ -0.75
BRCA1-218ENST00000489037 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 IFNA5P01569 189 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 AMBPP02760 352 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 CXCL3P19876 107 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
BRCA1-218ENST00000489037 GUK1Q16774 197 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 Q8NAQ8 132 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 RNF126Q9BV68 326 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 GOLT1BQ9Y3E0 138 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 HSPB11Q9Y547 144 aa10.37□□□□□ -0.75
BRCA1-218ENST00000489037 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 MRPS12O15235 138 aaKnown RBP10.36□□□□□ -0.75
BRCA1-218ENST00000489037 CNN1P51911 297 aaKnown RBP10.36□□□□□ -0.75
BRCA1-218ENST00000489037 RHOBP62745 196 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-218ENST00000489037 ATP5SQ99766 215 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 WDR61Q9GZS3 305 aaKnown RBP10.36□□□□□ -0.75
BRCA1-218ENST00000489037 SLC35B3Q9H1N7 401 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 HRH4Q9H3N8 390 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 X6R8D5 127 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
BRCA1-218ENST00000489037 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 LCE6AA0A183 80 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
BRCA1-218ENST00000489037 HIST1H1AQ02539 215 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-218ENST00000489037 RGS21Q2M5E4 152 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 MORN5Q5VZ52 161 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 PHLDA1Q8WV24 401 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-218ENST00000489037 RPUSD4Q96CM3 377 aaKnown RBP10.35□□□□□ -0.75
BRCA1-218ENST00000489037 NEU1Q99519 415 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 TMEM208Q9BTX3 173 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 ZNF331Q9NQX6 463 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-218ENST00000489037 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
BRCA1-218ENST00000489037 SNRPCP09234 159 aaKnown RBP10.34□□□□□ -0.75
BRCA1-218ENST00000489037 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
BRCA1-218ENST00000489037 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
BRCA1-218ENST00000489037 HLA-DMBP28068 263 aa10.34□□□□□ -0.75
BRCA1-218ENST00000489037 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
BRCA1-218ENST00000489037 ZNF705AQ6ZN79 300 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-218ENST00000489037 OR8A1Q8NGG7 326 aa10.34□□□□□ -0.75
BRCA1-218ENST00000489037 SMIM3Q9BZL3 60 aa10.34□□□□□ -0.75
BRCA1-218ENST00000489037 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 A8MTW9 85 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 H3BTX0 84 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-218ENST00000489037 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-218ENST00000489037 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 FCN2Q15485 313 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 OR11H7Q8NGC8 314 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 ASB13Q8WXK3 278 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 IGF2BP2-AS1Q96M15 143 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 TIMM9Q9Y5J7 89 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 RFNGQ9Y644 331 aa10.33□□□□□ -0.76
BRCA1-218ENST00000489037 ZNF705FA8MVS1 300 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-218ENST00000489037 C11orf94C9JXX5 98 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 H3BQ15 152 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 ZNF253O75346 499 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 INSP01308 110 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 HBE1P02100 147 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
BRCA1-218ENST00000489037 SPINK13Q1W4C9 94 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
BRCA1-218ENST00000489037 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
BRCA1-218ENST00000489037 BOLA2-SMG1P6H3BVE0 249 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 M0R2Z0 102 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 RRN3P1Q2M238 152 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 GCSAMLQ5JQS6 135 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-218ENST00000489037 AAMDCQ9H7C9 122 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 PRELID1Q9Y255 219 aa10.31□□□□□ -0.76
BRCA1-218ENST00000489037 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
BRCA1-218ENST00000489037 SLC17A3O00476 420 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-218ENST00000489037 TSPOP30536 169 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 EMP1P54849 157 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 PDE6HQ13956 83 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 C2CD4CQ8TF44 421 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 PARD6GQ9BYG4 376 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-218ENST00000489037 OR51M1Q9H341 326 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 FUT9Q9Y231 359 aa10.3□□□□□ -0.76
BRCA1-218ENST00000489037 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
BRCA1-218ENST00000489037 SPART-AS1P0CW21 52 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms