RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MEOX2P50222 304 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 ZNF680Q8NEM1 530 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 SFT2D1Q8WV19 159 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 UBQLN2Q9UHD9 624 aa9.24□□□□□ -0.93
TRAIP-209ENST00000488860 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 SORL1Q92673 2214 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 K7EQG2 157 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 SLC17A3O00476 420 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 WIPF1O43516 503 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 ZNF688P0C7X2 276 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 CD81P60033 236 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 GUK1Q16774 197 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 IGFL4Q6B9Z1 124 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 PRR25Q96S07 402 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 HRH4Q9H3N8 390 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 TMPRSS5Q9H3S3 457 aa9.23□□□□□ -0.93
TRAIP-209ENST00000488860 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
TRAIP-209ENST00000488860 TRBV19A0A075B6N1 114 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 TRAV2A0A0B4J234 112 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 HLA-DMBP28068 263 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 ID1P41134 155 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 GTSCR1Q86UQ5 136 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 PCNPQ8WW12 178 aaKnown RBP9.22□□□□□ -0.93
TRAIP-209ENST00000488860 MBD3L1Q8WWY6 194 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 LINC00052Q96N35 136 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 TMEM167BQ9NRX6 74 aa9.22□□□□□ -0.93
TRAIP-209ENST00000488860 SOCS3O14543 225 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 HBE1P02100 147 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 CD7P09564 240 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 PSMB3P49720 205 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 UBE2G2P60604 165 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.94
TRAIP-209ENST00000488860 BLOC1S1P78537 153 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 PSMG4Q5JS54 123 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 SAMD13Q5VXD3 122 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 MAP6D1Q9H9H5 199 aa9.21□□□□□ -0.94
TRAIP-209ENST00000488860 ZMAT5Q9UDW3 170 aaKnown RBP9.21□□□□□ -0.94
TRAIP-209ENST00000488860 TRAV8-2A0A0B4J237 113 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 ISLRO14498 428 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 NDUFB4O95168 129 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
TRAIP-209ENST00000488860 DEFB131AP59861 70 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 RANP62826 216 aaKnown RBP9.2□□□□□ -0.94
TRAIP-209ENST00000488860 PSG9Q00887 426 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 EGFEM1PQ0D2K5 195 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 PDE6HQ13956 83 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 EXOC3-AS1Q8N2X6 119 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF738Q8NE65 137 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
TRAIP-209ENST00000488860 C20orf173Q96LM9 149 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 Q9H3A6 140 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 AAMDCQ9H7C9 122 aa9.2□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF331Q9NQX6 463 aaPredicted RBP9.2□□□□□ -0.94
TRAIP-209ENST00000488860 DNAH3Q8TD57 4116 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 OR11H12B2RN74 326 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF253O75346 499 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 IFITM2Q01629 132 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 ICAM4Q14773 271 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 GNG13Q9P2W3 67 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
TRAIP-209ENST00000488860 PRB2P02812 416 aaPredicted RBP9.18□□□□□ -0.94
TRAIP-209ENST00000488860 DEFB1P60022 68 aa9.18□□□□□ -0.94
TRAIP-209ENST00000488860 CCL20P78556 96 aa9.18□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF124Q15973 351 aa9.18□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF767PQ75MW2 155 aa9.18□□□□□ -0.94
TRAIP-209ENST00000488860 YTHDF2Q9Y5A9 579 aaKnown RBP9.18□□□□□ -0.94
TRAIP-209ENST00000488860 AGRNO00468 2067 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 TRAV1-1A0A0B4J248 108 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 PGPA6NDG6 321 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 ZNF705FA8MVS1 300 aaPredicted RBP9.17□□□□□ -0.94
TRAIP-209ENST00000488860 M0R3E3 92 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 PAGE4O60829 102 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 IFNA1P01562 189 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 PPT1P50897 306 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 RAB14P61106 215 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 PSG3Q16557 428 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 CST9LP1Q5W188 147 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 SUN5Q8TC36 379 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 MANBALQ9NQG1 85 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
TRAIP-209ENST00000488860 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 KNCNA6PVL3 124 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 GGTLC3B5MD39 225 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 F6UB75 175 aa9.16□□□□□ -0.94
TRAIP-209ENST00000488860 SLC25A5P05141 298 aaKnown RBP9.16□□□□□ -0.94
TRAIP-209ENST00000488860 NMBP08949 121 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms