RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 ZNF586Q9NXT0 402 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 GNG13Q9P2W3 67 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 YTHDF2Q9Y5A9 579 aaKnown RBP8.11□□□□□ -1.11
USP11-209ENST00000488848 DNAH3Q8TD57 4116 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 ZNF785A8K8V0 405 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 F6UZH7 168 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 EIF3GO75821 320 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP11-209ENST00000488848 CSN3P07498 182 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 CBLN1P23435 193 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 SLURP1P55000 103 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 TOR2AQ5JU69 321 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 TMEM158Q8WZ71 300 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 DLX4Q92988 240 aaPredicted RBP8.1□□□□□ -1.11
USP11-209ENST00000488848 RPUSD4Q96CM3 377 aaKnown RBP8.1□□□□□ -1.11
USP11-209ENST00000488848 SLC35B3Q9H1N7 401 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 OTORQ9NRC9 128 aa8.1□□□□□ -1.11
USP11-209ENST00000488848 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 ZNF320A2RRD8 509 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 TMEM218A2RU14 115 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 KRBOX1C9JBD0 128 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 C11orf94C9JXX5 98 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 WIPF1O43516 503 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 PAGE4O60829 102 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 SRP19P09132 144 aaKnown RBP8.09□□□□□ -1.11
USP11-209ENST00000488848 OR10J4P0C629 311 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 FOLR2P14207 255 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 SRSF3P84103 164 aaKnown RBP8.09□□□□□ -1.11
USP11-209ENST00000488848 PSG9Q00887 426 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 LINC00482Q8N8I6 264 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 C5orf17Q8NAS9 161 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 OR2K2Q8NGT1 345 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 HIST1H2BAQ96A08 127 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 NRN1Q9NPD7 142 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 ZNF331Q9NQX6 463 aaPredicted RBP8.09□□□□□ -1.11
USP11-209ENST00000488848 MLXQ9UH92 298 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 PRELID1Q9Y255 219 aa8.09□□□□□ -1.11
USP11-209ENST00000488848 IGHV3OR16-8A0A075B7F1 116 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 TRBV6-1A0A0K0K1D8 114 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 C9JQL5 133 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 M0QZ24 198 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 ISLRO14498 428 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 OVOL1O14753 267 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 ATF4P18848 351 aaPredicted RBP8.08□□□□□ -1.12
USP11-209ENST00000488848 HAGHQ16775 308 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 SLC7A5P1Q8MH63 180 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 WFDC9Q8NEX5 89 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 C2CD4CQ8TF44 421 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 DCANP1Q8TF63 244 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 RARRES2Q99969 163 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 SEC11CQ9BY50 192 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 EIF5A2Q9GZV4 153 aaKnown RBP8.08□□□□□ -1.12
USP11-209ENST00000488848 CARHSP1Q9Y2V2 147 aaKnown RBP8.08□□□□□ -1.12
USP11-209ENST00000488848 KLF12Q9Y4X4 402 aa8.08□□□□□ -1.12
USP11-209ENST00000488848 A0A1B0GV50 99 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 FBLL1A6NHQ2 334 aaKnown RBP8.07□□□□□ -1.12
USP11-209ENST00000488848 SLC17A3O00476 420 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 TSPAN4O14817 238 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 ZNF207O43670 478 aaKnown RBP8.07□□□□□ -1.12
USP11-209ENST00000488848 ATP5G3P48201 142 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 C11orf44Q8N8P7 122 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 Q9H3A6 140 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
USP11-209ENST00000488848 TRAV8-2A0A0B4J237 113 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 RBAKDNA6NC62 111 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 C9JCJ5 164 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 SLC25A5P05141 298 aaKnown RBP8.06□□□□□ -1.12
USP11-209ENST00000488848 S100A9P06702 114 aaKnown RBP8.06□□□□□ -1.12
USP11-209ENST00000488848 INSL3P51460 131 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 CYB561D1Q8N8Q1 229 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 SMIM12Q96EX1 92 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 ATG101Q9BSB4 218 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 LY96Q9Y6Y9 160 aa8.06□□□□□ -1.12
USP11-209ENST00000488848 A0A1W2PRX2 142 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 K7EQG2 157 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 ATP6V1G1O75348 118 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 IGLV1-51P01701 117 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 TCRAP04437 139 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 SFTA3P0C7M3 94 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 ADCYAP1P18509 176 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 S100A1P23297 94 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 UBE2G2P60604 165 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 SUMO1P63165 101 aaKnown RBP8.05□□□□□ -1.12
USP11-209ENST00000488848 DEFB114Q30KQ6 69 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 COX8CQ7Z4L0 72 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 DUX3Q96PT4 197 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 SPAG8Q99932 426 aaPredicted RBP8.05□□□□□ -1.12
USP11-209ENST00000488848 FAM110AQ9BQ89 295 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 AAMDCQ9H7C9 122 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 EPDR1Q9UM22 224 aa8.05□□□□□ -1.12
USP11-209ENST00000488848 PEX7O00628 323 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms