RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 IGHV4-28A0A0C4DH34 117 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 UBE2L5PA0A1B0GUS4 154 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 DEFB4AO15263 64 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 C1QBP02746 253 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 RPL29P47914 159 aaKnown RBP10.27□□□□□ -0.77
COL9A2-208ENST00000488463 BAXQ07812 192 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 LINC00305Q7Z4B0 112 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 RPRMQ9NS64 109 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
COL9A2-208ENST00000488463 ELOA3CA0A087WX78 387 aaPredicted RBP10.26□□□□□ -0.77
COL9A2-208ENST00000488463 HMSDA8MTL9 139 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 PMS2P11Q13670 270 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
COL9A2-208ENST00000488463 MFFQ9GZY8 342 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 SLC35B3Q9H1N7 401 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 DNAJC4Q9NNZ3 241 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 DNAH6Q9C0G6 4158 aa10.26□□□□□ -0.77
COL9A2-208ENST00000488463 A0A0D9SG52 128 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF705FA8MVS1 300 aaPredicted RBP10.25□□□□□ -0.77
COL9A2-208ENST00000488463 COX7A2P2O60397 106 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF705DP0CH99 300 aaPredicted RBP10.25□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF705BP0CI00 300 aaPredicted RBP10.25□□□□□ -0.77
COL9A2-208ENST00000488463 IGLC2P0DOY2 106 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 MIFP14174 115 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 NUTF2P61970 127 aaKnown RBP10.25□□□□□ -0.77
COL9A2-208ENST00000488463 RAB31Q13636 194 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 SLC39A9Q9NUM3 307 aa10.25□□□□□ -0.77
COL9A2-208ENST00000488463 DNAH10Q8IVF4 4471 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 CXorf65A6NEN9 183 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 TAAR5O14804 337 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 ARPC5O15511 151 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 FGF7P21781 194 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 FXYD7P58549 80 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 NANOS2P60321 138 aaKnown RBP10.24□□□□□ -0.77
COL9A2-208ENST00000488463 PSG9Q00887 426 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 C10orf113Q5VZT2 155 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
COL9A2-208ENST00000488463 S100A7AQ86SG5 101 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 OR4B1Q8NGF8 309 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 SAT2Q96F10 170 aaPredicted RBP10.24□□□□□ -0.77
COL9A2-208ENST00000488463 NPCDR1Q9BY65 106 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 TNFSF18Q9UNG2 199 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 PXMP4Q9Y6I8 212 aa10.24□□□□□ -0.77
COL9A2-208ENST00000488463 BORCS7-ASMTA0A0B4J1R7 106 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 H3BQ15 152 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 SMLR1H3BR10 107 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 SLC17A3O00476 420 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 MPDU1O75352 247 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 IFNA5P01569 189 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
COL9A2-208ENST00000488463 CNN1P51911 297 aaKnown RBP10.23□□□□□ -0.77
COL9A2-208ENST00000488463 B2MP61769 119 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 PSG3Q16557 428 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 Q5BKY6 102 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 GCSAMLQ5JQS6 135 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 EBLN2Q6P2I7 272 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 Q6ZRG5 221 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 BPIFA4PQ86YQ2 179 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 C1orf158Q8N1D5 194 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 AQP10Q96PS8 301 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 NEU1Q99519 415 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 HRH4Q9H3N8 390 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF331Q9NQX6 463 aaPredicted RBP10.23□□□□□ -0.77
COL9A2-208ENST00000488463 RNF24Q9Y225 148 aa10.23□□□□□ -0.77
COL9A2-208ENST00000488463 KANTRA0A1W2PQU2 76 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
COL9A2-208ENST00000488463 CXCL2P19875 107 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 EIF5AP63241 154 aaKnown RBP10.22□□□□□ -0.77
COL9A2-208ENST00000488463 CLINT1Q14677 625 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 LCN15Q6UWW0 184 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 OR1L4Q8NGR5 311 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 C11orf45Q8TAV5 145 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 SCGB1C1Q8TD33 95 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 PHLDA1Q8WV24 401 aaPredicted RBP10.22□□□□□ -0.77
COL9A2-208ENST00000488463 PFDN5Q99471 154 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 HSPB11Q9Y547 144 aa10.22□□□□□ -0.77
COL9A2-208ENST00000488463 H3BTX0 84 aa10.21□□□□□ -0.77
COL9A2-208ENST00000488463 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF266Q14584 549 aa10.21□□□□□ -0.77
COL9A2-208ENST00000488463 ZNF345Q14585 488 aa10.21□□□□□ -0.77
COL9A2-208ENST00000488463 OR8A1Q8NGG7 326 aa10.21□□□□□ -0.77
COL9A2-208ENST00000488463 WDR61Q9GZS3 305 aaKnown RBP10.21□□□□□ -0.77
COL9A2-208ENST00000488463 CELA1Q9UNI1 258 aa10.21□□□□□ -0.77
COL9A2-208ENST00000488463 FRAS1Q86XX4 4008 aa10.21□□□□□ -0.78
COL9A2-208ENST00000488463 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
COL9A2-208ENST00000488463 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
COL9A2-208ENST00000488463 FAM167A-AS1Q96KT0 104 aa10.2□□□□□ -0.78
COL9A2-208ENST00000488463 ARPC5LQ9BPX5 153 aa10.2□□□□□ -0.78
COL9A2-208ENST00000488463 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
COL9A2-208ENST00000488463 ZNF586Q9NXT0 402 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms