RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 C17orf112F2Z3M2 114 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 H3BQ15 152 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 H3BTX0 84 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 SLC17A3O00476 420 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 IFNA5P01569 189 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 SPATA31B1PQ5VZV4 182 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 HRH4Q9H3N8 390 aa11.66□□□□□ -0.54
ERGIC3-216ENST00000488384 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 A8MTW9 85 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 CSNK1G2-AS1Q8NCQ2 148 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 OR11H2Q8NH07 326 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 RARRES2Q99969 163 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 SLC50A1Q9BRV3 221 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 ZNF331Q9NQX6 463 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 CLEC5AQ9NY25 188 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
ERGIC3-216ENST00000488384 RNF222A6NCQ9 220 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 NUTF2P61970 127 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 PSG3Q16557 428 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 OR4B1Q8NGF8 309 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 FAM167A-AS1Q96KT0 104 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 SLC25A2Q9BXI2 301 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 RFNGQ9Y644 331 aa11.64□□□□□ -0.55
ERGIC3-216ENST00000488384 FXYD6-FXYD2A0A087WZ82 144 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 PYYP10082 97 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 PRB4P10163 310 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 FFAR4Q5NUL3 377 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 CASC10Q5T4H9 136 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 AMTNQ6UX39 209 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 SAT2Q96F10 170 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 C1QTNF4Q9BXJ3 329 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 MRPL32Q9BYC8 188 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF705EA8MWA4 302 aaPredicted RBP11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 FXYD7P58549 80 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 PSG9Q00887 426 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF266Q14584 549 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 GUK1Q16774 197 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 LYSTQ99698 3801 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 C11orf68Q9H3H3 251 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 FUT9Q9Y231 359 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 X6R8D5 127 aa11.62□□□□□ -0.55
ERGIC3-216ENST00000488384 TRBV19A0A075B6N1 114 aa11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 Q8NAQ8 132 aa11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 OR8A1Q8NGG7 326 aa11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 MFFQ9GZY8 342 aa11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF705FA8MVS1 300 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF253O75346 499 aa11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 NDUFB4O95168 129 aa11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 HIST1H1AQ02539 215 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 HSD17B11Q8NBQ5 300 aa11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 IL17DQ8TAD2 202 aa11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 TENM2Q9NT68 2774 aa11.6□□□□□ -0.55
ERGIC3-216ENST00000488384 DNAH1Q9P2D7 4330 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 IGHV4-28A0A0C4DH34 117 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 DEFB4AO15263 64 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 RAB2AP61019 212 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 PDE6HQ13956 83 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 FXYD5Q96DB9 178 aa11.59□□□□□ -0.55
ERGIC3-216ENST00000488384 OR10J4P0C629 311 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 RHOBP62745 196 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 OR2G3Q8NGZ4 309 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 BLNKQ8WV28 456 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 ZNF503Q96F45 646 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 OR51M1Q9H341 326 aa11.58□□□□□ -0.56
ERGIC3-216ENST00000488384 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
ERGIC3-216ENST00000488384 M0R2Z0 102 aa11.57□□□□□ -0.56
ERGIC3-216ENST00000488384 M0R3E3 92 aa11.57□□□□□ -0.56
ERGIC3-216ENST00000488384 ARPC5O15511 151 aa11.57□□□□□ -0.56
ERGIC3-216ENST00000488384 OR7C2O60412 319 aa11.57□□□□□ -0.56
ERGIC3-216ENST00000488384 EIF3GO75821 320 aaKnown RBP eCLIP11.57□□□□□ -0.56
ERGIC3-216ENST00000488384 RBMY1A1P0DJD3 496 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms