RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 LINC00322Q6ZN03 302 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-210ENST00000488228 OR2G3Q8NGZ4 309 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 RETNQ9HD89 108 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 RNF24Q9Y225 148 aa8.16□□□□□ -1.1
UBE4B-210ENST00000488228 LOC102724200A0A096LPH7 203 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-210ENST00000488228 A0A0D9SG52 128 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 KANTRA0A1W2PQU2 76 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 F6UB75 175 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 OR7C2O60412 319 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 PFDN1O60925 122 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 M6PRP20645 277 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-210ENST00000488228 RHOBP62745 196 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 ACOT6Q3I5F7 207 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-210ENST00000488228 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 SAMD13Q5VXD3 122 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 TMUB2Q71RG4 321 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 GNPNAT1Q96EK6 184 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-210ENST00000488228 ZNF471Q9BX82 626 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-210ENST00000488228 ZNF586Q9NXT0 402 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 TMEM14CQ9P0S9 112 aa8.15□□□□□ -1.1
UBE4B-210ENST00000488228 HMGB3O15347 200 aaKnown RBP8.14□□□□□ -1.11
UBE4B-210ENST00000488228 JTBO76095 146 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 OR10J4P0C629 311 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 UBE2L3P68036 154 aaKnown RBP8.14□□□□□ -1.11
UBE4B-210ENST00000488228 ZFP69Q49AA0 526 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 KHDC3LQ587J8 217 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 SSX7Q7RTT5 188 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
UBE4B-210ENST00000488228 STHQ8IWL8 128 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 OR10G4Q8NGN3 311 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 OR10G9Q8NGN4 311 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 OR10G7Q8NGN6 311 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 LRRC20Q8TCA0 184 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF503Q96F45 646 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 HRH4Q9H3N8 390 aa8.14□□□□□ -1.11
UBE4B-210ENST00000488228 HLA-DRB4P13762 266 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 CDC34P49427 236 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-210ENST00000488228 LGALSLQ3ZCW2 172 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-210ENST00000488228 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 C9orf62Q8N4C0 152 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 RPP25LQ8N5L8 163 aaKnown RBP8.13□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF738Q8NE65 137 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 FXYD5Q96DB9 178 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 PHYHIPLQ96FC7 376 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 TM2D3Q9BRN9 247 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 SLC50A1Q9BRV3 221 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 PAXXQ9BUH6 204 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-210ENST00000488228 RPRMQ9NS64 109 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 HLA-DRB4X5D2U9 266 aa8.13□□□□□ -1.11
UBE4B-210ENST00000488228 TRBV19A0A075B6N1 114 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 A0A1W2PPV4 95 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 NDUFB4O95168 129 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 IGKV3-20P01619 116 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF705DP0CH99 300 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF705BP0CI00 300 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-210ENST00000488228 ARL14EPLP0DKL9 152 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 HIST1H1EP10412 219 aaKnown RBP8.12□□□□□ -1.11
UBE4B-210ENST00000488228 C4BPBP20851 252 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 NKX2-5P52952 324 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-210ENST00000488228 APOC4P55056 127 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 TAS2R45P59539 299 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 SERF2P84101 59 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 GUK1Q16774 197 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 DEFB135Q30KP9 77 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 FOXI2Q6ZQN5 318 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-210ENST00000488228 HYLS1Q96M11 299 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 OR51M1Q9H341 326 aa8.12□□□□□ -1.11
UBE4B-210ENST00000488228 SAV1Q9H4B6 383 aaPredicted RBP8.12□□□□□ -1.11
UBE4B-210ENST00000488228 A0A0J9YX75 114 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF705FA8MVS1 300 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-210ENST00000488228 H3BMM0 161 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 CA1P00915 261 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-210ENST00000488228 MBP02144 154 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 SPP1P10451 314 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 PSG3Q16557 428 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 AKR1C8PQ5T2L2 129 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 EXOC3-AS1Q8N2X6 119 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 RNF141Q8WVD5 230 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 RAB24Q969Q5 203 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 RPUSD4Q96CM3 377 aaKnown RBP8.11□□□□□ -1.11
UBE4B-210ENST00000488228 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
UBE4B-210ENST00000488228 KIR2DL5BA0A0G2JN68 375 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 KIR2DL5BA0A0G2JPC4 375 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 M0R3E3 92 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 ZNF253O75346 499 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 TPT1P13693 172 aaKnown RBP8.1□□□□□ -1.11
UBE4B-210ENST00000488228 FXYD7P58549 80 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 HIST1H1AQ02539 215 aaPredicted RBP8.1□□□□□ -1.11
UBE4B-210ENST00000488228 PDE6HQ13956 83 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 EBLN2Q6P2I7 272 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 KIR2DL5AQ8N109 375 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
UBE4B-210ENST00000488228 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms