RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 PRB4P10163 310 aaPredicted RBP17.1■□□□□ 0.33
RNF38-208ENST00000488058 CXCL3P19876 107 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 PRR20EP86478 221 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 PRR20CP86479 221 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 PRR20DP86480 221 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 PRR20BP86481 221 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 PRR20AP86496 221 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 OPCMLQ14982 345 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 BPIFA4PQ86YQ2 179 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 OR1L4Q8NGR5 311 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 DNAJC4Q9NNZ3 241 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 CELA1Q9UNI1 258 aa17.1■□□□□ 0.33
RNF38-208ENST00000488058 ALMS1Q8TCU4 4167 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 ZNF705FA8MVS1 300 aaPredicted RBP17.09■□□□□ 0.33
RNF38-208ENST00000488058 E5RGE8 158 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 H3BTX0 84 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 EMP1P54849 157 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 B2MP61769 119 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 CYCSP99999 105 aaKnown RBP17.09■□□□□ 0.33
RNF38-208ENST00000488058 NHLH2Q02577 135 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 ZNF767PQ75MW2 155 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 C2CD4CQ8TF44 421 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 SLC25A31Q9H0C2 315 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 SLC39A9Q9NUM3 307 aa17.09■□□□□ 0.33
RNF38-208ENST00000488058 HIST1H1AQ02539 215 aaPredicted RBP17.08■□□□□ 0.32
RNF38-208ENST00000488058 PSG3Q16557 428 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 LCN15Q6UWW0 184 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 AMTNQ6UX39 209 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 Q6ZTC4 211 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 OR11H7Q8NGC8 314 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 PFDN5Q99471 154 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 NEU1Q99519 415 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 PXMP4Q9Y6I8 212 aa17.08■□□□□ 0.32
RNF38-208ENST00000488058 TRAV5A0A0B4J249 113 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 SMIM9A6NGZ8 99 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 A8MTW9 85 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 C11orf94C9JXX5 98 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 M0R2Z0 102 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 RPL29P47914 159 aaKnown RBP17.07■□□□□ 0.32
RNF38-208ENST00000488058 H2BFSP57053 126 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 RHOBP62745 196 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 SPINK13Q1W4C9 94 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 OR5C1Q8NGR4 320 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 TMEM208Q9BTX3 173 aa17.07■□□□□ 0.32
RNF38-208ENST00000488058 IGLL5B9A064 214 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 H0YIZ8 118 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 CXCL2P19875 107 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 CLINT1Q14677 625 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 C1orf158Q8N1D5 194 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 THAP6Q8TBB0 222 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 SLC50A1Q9BRV3 221 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 PPP1R14DQ9NXH3 145 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 RFNGQ9Y644 331 aa17.06■□□□□ 0.32
RNF38-208ENST00000488058 PLECQ15149 4684 aaKnown RBP17.05■□□□□ 0.32
RNF38-208ENST00000488058 TRAV10A0A0B4J240 114 aa17.05■□□□□ 0.32
RNF38-208ENST00000488058 HBE1P02100 147 aa17.05■□□□□ 0.32
RNF38-208ENST00000488058 OR8A1Q8NGG7 326 aa17.05■□□□□ 0.32
RNF38-208ENST00000488058 PPP1R1CQ8WVI7 109 aa17.05■□□□□ 0.32
RNF38-208ENST00000488058 RPUSD4Q96CM3 377 aaKnown RBP17.05■□□□□ 0.32
RNF38-208ENST00000488058 IGF2BP2-AS1Q96M15 143 aa17.05■□□□□ 0.32
RNF38-208ENST00000488058 ZNF331Q9NQX6 463 aaPredicted RBP17.05■□□□□ 0.32
RNF38-208ENST00000488058 SLC17A3O00476 420 aa17.04■□□□□ 0.32
RNF38-208ENST00000488058 MPDU1O75352 247 aa17.04■□□□□ 0.32
RNF38-208ENST00000488058 AMBPP02760 352 aa17.04■□□□□ 0.32
RNF38-208ENST00000488058 NPCDR1Q9BY65 106 aa17.04■□□□□ 0.32
RNF38-208ENST00000488058 HYDINQ4G0P3 5121 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 TMEM189A5PLL7 270 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 BOLA2-SMG1P6H3BVE0 249 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 INSP01308 110 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 C12orf74Q32Q52 190 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 BAP18Q8IXM2 172 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 DNAH1Q9P2D7 4330 aa17.03■□□□□ 0.32
RNF38-208ENST00000488058 H3BQ15 152 aa17.02■□□□□ 0.32
RNF38-208ENST00000488058 IGLC2P0DOY2 106 aa17.02■□□□□ 0.32
RNF38-208ENST00000488058 RRN3P1Q2M238 152 aa17.02■□□□□ 0.32
RNF38-208ENST00000488058 CHAC2Q8WUX2 184 aa17.02■□□□□ 0.32
RNF38-208ENST00000488058 TRAV12-2A0A075B6T6 113 aa17.01■□□□□ 0.31
RNF38-208ENST00000488058 LOC102723971A0A1B0GUV8 181 aa17.01■□□□□ 0.31
RNF38-208ENST00000488058 SPART-AS1P0CW21 52 aa17.01■□□□□ 0.31
RNF38-208ENST00000488058 PET100P0DJ07 73 aa17.01■□□□□ 0.31
RNF38-208ENST00000488058 CRXO43186 299 aaPredicted RBP17■□□□□ 0.31
RNF38-208ENST00000488058 MPC2O95563 127 aa17■□□□□ 0.31
RNF38-208ENST00000488058 GCSAMLQ5JQS6 135 aa17■□□□□ 0.31
RNF38-208ENST00000488058 DEFB131BA0A096LNP1 70 aa16.99■□□□□ 0.31
RNF38-208ENST00000488058 GUK1Q16774 197 aa16.99■□□□□ 0.31
RNF38-208ENST00000488058 FAM222AQ5U5X8 452 aa16.99■□□□□ 0.31
RNF38-208ENST00000488058 RNF126Q9BV68 326 aa16.99■□□□□ 0.31
RNF38-208ENST00000488058 ZNF586Q9NXT0 402 aa16.99■□□□□ 0.31
RNF38-208ENST00000488058 ALG5Q9Y673 324 aa16.99■□□□□ 0.31
RNF38-208ENST00000488058 ZNF705GA8MUZ8 300 aaPredicted RBP16.98■□□□□ 0.31
RNF38-208ENST00000488058 TCTAP57738 103 aa16.98■□□□□ 0.31
RNF38-208ENST00000488058 LGALS9CQ6DKI2 356 aa16.98■□□□□ 0.31
RNF38-208ENST00000488058 OR10J6PQ8NGY7 276 aa16.98■□□□□ 0.31
RNF38-208ENST00000488058 SAT2Q96F10 170 aaPredicted RBP16.98■□□□□ 0.31
RNF38-208ENST00000488058 WDR61Q9GZS3 305 aaKnown RBP16.98■□□□□ 0.31
RNF38-208ENST00000488058 APLNQ9ULZ1 77 aa16.98■□□□□ 0.31
RNF38-208ENST00000488058 YTHDF2Q9Y5A9 579 aaKnown RBP16.98■□□□□ 0.31
RNF38-208ENST00000488058 IGHV4-4A0A075B6R2 117 aa16.97■□□□□ 0.31
RNF38-208ENST00000488058 PRAC2D3DTV9 90 aa16.97■□□□□ 0.31
RNF38-208ENST00000488058 SMIM3Q9BZL3 60 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms