RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 SMIM3Q9BZL3 60 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 SAV1Q9H4B6 383 aaPredicted RBP8.86□□□□□ -0.99
SDC3-204ENST00000487984 UQCC1Q9NVA1 299 aa8.86□□□□□ -0.99
SDC3-204ENST00000487984 VPS13DQ5THJ4 4388 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 DNAH10Q8IVF4 4471 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 TRAV10A0A0B4J240 114 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 ID1P41134 155 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 CLINT1Q14677 625 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 FOXI2Q6ZQN5 318 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 OR8I2Q8N0Y5 310 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
SDC3-204ENST00000487984 DNAH6Q9C0G6 4158 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 PMS2P5A8MQ11 134 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 MPDU1O75352 247 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 FXYD7P58549 80 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 RAB31Q13636 194 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 ZNF705AQ6ZN79 300 aaPredicted RBP8.84□□□□□ -0.99
SDC3-204ENST00000487984 ZNF767PQ75MW2 155 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 BAP18Q8IXM2 172 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 ZNF709Q8N972 641 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 STOML3Q8TAV4 291 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 GNPNAT1Q96EK6 184 aaPredicted RBP8.84□□□□□ -0.99
SDC3-204ENST00000487984 PHYHIPLQ96FC7 376 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
SDC3-204ENST00000487984 NPVFQ9HCQ7 196 aa8.84□□□□□ -0.99
SDC3-204ENST00000487984 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
SDC3-204ENST00000487984 SMCO3A2RU48 225 aa8.83□□□□□ -1
SDC3-204ENST00000487984 ZNF705FA8MVS1 300 aaPredicted RBP8.83□□□□□ -1
SDC3-204ENST00000487984 ISLRO14498 428 aa8.83□□□□□ -1
SDC3-204ENST00000487984 CFDP00746 253 aaPredicted RBP8.83□□□□□ -1
SDC3-204ENST00000487984 IFNA7P01567 189 aa8.83□□□□□ -1
SDC3-204ENST00000487984 ZNF705DP0CH99 300 aaPredicted RBP8.83□□□□□ -1
SDC3-204ENST00000487984 ZNF705BP0CI00 300 aaPredicted RBP8.83□□□□□ -1
SDC3-204ENST00000487984 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
SDC3-204ENST00000487984 AKR1C1Q04828 323 aa8.83□□□□□ -1
SDC3-204ENST00000487984 RPL7L1Q6DKI1 246 aaKnown RBP8.83□□□□□ -1
SDC3-204ENST00000487984 TMEM182Q6ZP80 229 aaPredicted RBP8.83□□□□□ -1
SDC3-204ENST00000487984 OR4B1Q8NGF8 309 aa8.83□□□□□ -1
SDC3-204ENST00000487984 C20orf173Q96LM9 149 aa8.83□□□□□ -1
SDC3-204ENST00000487984 C17orf77Q96MU5 243 aa8.83□□□□□ -1
SDC3-204ENST00000487984 CLUHP3Q96NS8 147 aa8.83□□□□□ -1
SDC3-204ENST00000487984 NEU1Q99519 415 aa8.83□□□□□ -1
SDC3-204ENST00000487984 SLC25A32Q9H2D1 315 aa8.83□□□□□ -1
SDC3-204ENST00000487984 SLC25A22Q9H936 323 aa8.83□□□□□ -1
SDC3-204ENST00000487984 KCNIP2Q9NS61 270 aa8.83□□□□□ -1
SDC3-204ENST00000487984 SLC45A2Q9UMX9 530 aa8.83□□□□□ -1
SDC3-204ENST00000487984 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
SDC3-204ENST00000487984 A0A0J9YX75 114 aa8.82□□□□□ -1
SDC3-204ENST00000487984 ZNF98A6NK75 572 aa8.82□□□□□ -1
SDC3-204ENST00000487984 C17orf112F2Z3M2 114 aa8.82□□□□□ -1
SDC3-204ENST00000487984 F6UB75 175 aa8.82□□□□□ -1
SDC3-204ENST00000487984 ORM2P19652 201 aa8.82□□□□□ -1
SDC3-204ENST00000487984 GALR1P47211 349 aa8.82□□□□□ -1
SDC3-204ENST00000487984 ARL16Q0P5N6 197 aa8.82□□□□□ -1
SDC3-204ENST00000487984 VWC2Q2TAL6 325 aa8.82□□□□□ -1
SDC3-204ENST00000487984 FAM78BQ5VT40 261 aa8.82□□□□□ -1
SDC3-204ENST00000487984 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
SDC3-204ENST00000487984 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
SDC3-204ENST00000487984 BPIFCQ8NFQ6 507 aa8.82□□□□□ -1
SDC3-204ENST00000487984 C16orf92Q96LL3 132 aa8.82□□□□□ -1
SDC3-204ENST00000487984 SLC35B3Q9H1N7 401 aa8.82□□□□□ -1
SDC3-204ENST00000487984 CYTL1Q9NRR1 136 aa8.82□□□□□ -1
SDC3-204ENST00000487984 IGHV3OR16-12A0A075B7B8 117 aa8.81□□□□□ -1
SDC3-204ENST00000487984 DEFB131BA0A096LNP1 70 aa8.81□□□□□ -1
SDC3-204ENST00000487984 UBE2L5PA0A1B0GUS4 154 aa8.81□□□□□ -1
SDC3-204ENST00000487984 AMBPP02760 352 aa8.81□□□□□ -1
SDC3-204ENST00000487984 MEOX2P50222 304 aa8.81□□□□□ -1
SDC3-204ENST00000487984 EMP1P54849 157 aa8.81□□□□□ -1
SDC3-204ENST00000487984 PSG9Q00887 426 aa8.81□□□□□ -1
SDC3-204ENST00000487984 EBLN2Q6P2I7 272 aa8.81□□□□□ -1
SDC3-204ENST00000487984 TEPPQ6URK8 271 aa8.81□□□□□ -1
SDC3-204ENST00000487984 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
SDC3-204ENST00000487984 TMEM144Q7Z5S9 345 aa8.81□□□□□ -1
SDC3-204ENST00000487984 OR1B1Q8NGR6 318 aa8.81□□□□□ -1
SDC3-204ENST00000487984 RSG1Q9BU20 258 aa8.81□□□□□ -1
SDC3-204ENST00000487984 SCRT1Q9BWW7 348 aa8.81□□□□□ -1
SDC3-204ENST00000487984 KRTAP17-1Q9BYP8 105 aa8.81□□□□□ -1
SDC3-204ENST00000487984 WDR61Q9GZS3 305 aaKnown RBP8.81□□□□□ -1
SDC3-204ENST00000487984 WFDC1Q9HC57 220 aa8.81□□□□□ -1
SDC3-204ENST00000487984 WDR83OSQ9Y284 106 aa8.81□□□□□ -1
SDC3-204ENST00000487984 TMEM189A5PLL7 270 aa8.8□□□□□ -1
SDC3-204ENST00000487984 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
SDC3-204ENST00000487984 SEC11BP0C7V7 166 aa8.8□□□□□ -1
SDC3-204ENST00000487984 FGF7P21781 194 aa8.8□□□□□ -1
SDC3-204ENST00000487984 TEX261Q6UWH6 196 aa8.8□□□□□ -1
SDC3-204ENST00000487984 CYP2G1PQ6ZSU1 146 aa8.8□□□□□ -1
SDC3-204ENST00000487984 HSD17B11Q8NBQ5 300 aa8.8□□□□□ -1
SDC3-204ENST00000487984 PSMG3Q9BT73 122 aaPredicted RBP8.8□□□□□ -1
SDC3-204ENST00000487984 ARV1Q9H2C2 271 aa8.8□□□□□ -1
SDC3-204ENST00000487984 RPRMQ9NS64 109 aa8.8□□□□□ -1
SDC3-204ENST00000487984 DOK5Q9P104 306 aa8.8□□□□□ -1
SDC3-204ENST00000487984 TIMM9Q9Y5J7 89 aa8.8□□□□□ -1
SDC3-204ENST00000487984 RFNGQ9Y644 331 aa8.8□□□□□ -1
SDC3-204ENST00000487984 H3BRN7 92 aa8.79□□□□□ -1
SDC3-204ENST00000487984 SPART-AS1P0CW21 52 aa8.79□□□□□ -1
SDC3-204ENST00000487984 RAB14P61106 215 aa8.79□□□□□ -1
SDC3-204ENST00000487984 SERF2P84101 59 aa8.79□□□□□ -1
SDC3-204ENST00000487984 C1orf158Q8N1D5 194 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms