RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ARPC5O15511 151 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 JTBO76095 146 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.69
LIMS3-205ENST00000487150 M6PRP20645 277 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 SERF2P84101 59 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 DEFB135Q30KP9 77 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 OR2G3Q8NGZ4 309 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 RNF183Q96D59 192 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 MFFQ9GZY8 342 aa10.77□□□□□ -0.69
LIMS3-205ENST00000487150 ZNF331Q9NQX6 463 aaPredicted RBP10.77□□□□□ -0.69
LIMS3-205ENST00000487150 A0A1W2PPV4 95 aa10.76□□□□□ -0.69
LIMS3-205ENST00000487150 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
LIMS3-205ENST00000487150 AMBPP02760 352 aa10.76□□□□□ -0.69
LIMS3-205ENST00000487150 PSG9Q00887 426 aa10.76□□□□□ -0.69
LIMS3-205ENST00000487150 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
LIMS3-205ENST00000487150 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
LIMS3-205ENST00000487150 WFDC1Q9HC57 220 aa10.76□□□□□ -0.69
LIMS3-205ENST00000487150 A0A0J9YX75 114 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 G3V3Q6 166 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 OR7C2O60412 319 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 PSG3Q16557 428 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 Q6ZNX1 250 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 HSD17B11Q8NBQ5 300 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 IL17DQ8TAD2 202 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 PRELID1Q9Y255 219 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 DNAH9Q9NYC9 4486 aa10.75□□□□□ -0.69
LIMS3-205ENST00000487150 TGP01266 2768 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 A0A0D9SG52 128 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 EIF5AP63241 154 aaKnown RBP10.74□□□□□ -0.69
LIMS3-205ENST00000487150 PQLC2Q6ZP29 291 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 MIR17HGQ75NE6 70 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 PAXXQ9BUH6 204 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 SLC25A2Q9BXI2 301 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 OR51M1Q9H341 326 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 RETNQ9HD89 108 aa10.74□□□□□ -0.69
LIMS3-205ENST00000487150 TRAV5A0A0B4J249 113 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 UBE2L3P68036 154 aaKnown RBP10.73□□□□□ -0.69
LIMS3-205ENST00000487150 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
LIMS3-205ENST00000487150 SAT2Q96F10 170 aaPredicted RBP10.73□□□□□ -0.69
LIMS3-205ENST00000487150 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 ARPC5LQ9BPX5 153 aa10.73□□□□□ -0.69
LIMS3-205ENST00000487150 KANTRA0A1W2PQU2 76 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 A8MTW9 85 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 H3BQ15 152 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 NBEAP1P0C6P0 100 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 RPL7L1Q6DKI1 246 aaKnown RBP10.72□□□□□ -0.69
LIMS3-205ENST00000487150 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 KCNRGQ8N5I3 272 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 OR10G4Q8NGN3 311 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 FAM167A-AS1Q96KT0 104 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 RARRES2Q99969 163 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
LIMS3-205ENST00000487150 SLC17A3O00476 420 aa10.71□□□□□ -0.69
LIMS3-205ENST00000487150 PYYP10082 97 aa10.71□□□□□ -0.69
LIMS3-205ENST00000487150 C4BPBP20851 252 aa10.71□□□□□ -0.69
LIMS3-205ENST00000487150 CDC34P49427 236 aaPredicted RBP10.71□□□□□ -0.69
LIMS3-205ENST00000487150 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
LIMS3-205ENST00000487150 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
LIMS3-205ENST00000487150 GDF5OSQ5U4N7 250 aa10.71□□□□□ -0.69
LIMS3-205ENST00000487150 AKAP14Q86UN6 197 aa10.71□□□□□ -0.69
LIMS3-205ENST00000487150 OR11H2Q8NH07 326 aa10.71□□□□□ -0.69
LIMS3-205ENST00000487150 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 MIFP14174 115 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 TSPOP30536 169 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 RAB2AP61019 212 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 FAM74A1Q5RGS3 127 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 AKR1C8PQ5T2L2 129 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 BLNKQ8WV28 456 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 ACTR3CQ9C0K3 210 aaPredicted RBP10.7□□□□□ -0.7
LIMS3-205ENST00000487150 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
LIMS3-205ENST00000487150 EDA2RQ9HAV5 297 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 GOLT1BQ9Y3E0 138 aa10.7□□□□□ -0.7
LIMS3-205ENST00000487150 F6UB75 175 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 C3orf84H3BNL1 204 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 BOLA2-SMG1P6H3BVE0 249 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 BCL2L11O43521 198 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 PFDN1O60925 122 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 CSN1S1P47710 185 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 FAM122CQ6P4D5 195 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 MUC7Q8TAX7 377 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 FXYD5Q96DB9 178 aa10.69□□□□□ -0.7
LIMS3-205ENST00000487150 XCL2Q9UBD3 114 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms