RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 NCR2O95944 276 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 MBNL2Q5VZF2 373 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 C1orf229Q6ZS94 237 aaPredicted RBP9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 FOXA2Q9Y261 457 aaPredicted RBP9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 A0A1B0GUT8 65 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 SMKR1H3BMG3 65 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 CKS2P33552 79 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 HELZ2Q9BYK8 2649 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 J3KRW8 73 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 ARMS2P0C7Q2 107 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 RNASE2P10153 161 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 RPL27AP46776 148 aaKnown RBP9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 TWIST1Q15672 202 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 OR4F17Q8NGA8 305 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 PRR7Q8TB68 274 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 GAFA1Q96PS6 74 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 ZNF257Q9Y2Q1 563 aa9.95□□□□□ -0.82
SHROOM3-208ENST00000486758 DSCAML1Q8TD84 2053 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 A0A0G2JLM5 398 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 C22orf46C9J442 243 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 ORM1P02763 201 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 SEM1Q6ZVN7 128 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 OR4C13Q8NGP0 309 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 RASL11BQ9BPW5 248 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 HIGD1AQ9Y241 93 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 C2orf70A6NJV1 201 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 LCNL1Q6ZST4 164 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 VSTM2AQ8TAG5 236 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 ZNF414Q96IQ9 312 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 TPSG1Q9NRR2 321 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 TMEM14BQ9NUH8 114 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 RPUSD1Q9UJJ7 312 aaKnown RBP9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 A0A0G2JNJ9 132 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 H0YJW9 148 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 CFHR2P36980 270 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 IFI27P40305 119 aaPredicted RBP9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 FER1L6-AS1Q8NA97 138 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 Q9UFV3 132 aa9.94□□□□□ -0.82
SHROOM3-208ENST00000486758 CCL21O00585 134 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 LOXL3P58215 753 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 TMEM200BQ69YZ2 307 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 C19orf24Q9BVV8 132 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 KLK15Q9H2R5 256 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 SORL1Q92673 2214 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 KLF17Q5JT82 389 aaPredicted RBP9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 M0R3E3 92 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 CD5LO43866 347 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 SAMD13Q5VXD3 122 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 CSTL1Q9H114 145 aa9.93□□□□□ -0.82
SHROOM3-208ENST00000486758 TCRBV4S1A1TA0A5B7 111 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 CGB1A6NKQ9 187 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 CNTFRP26992 372 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 DEFB125Q8N687 156 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 JKAMPQ9P055 326 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 IGKV3-7A0A075B6H7 116 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 D6R8Y8 96 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 TOMM40O96008 361 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 PET117Q6UWS5 81 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 FAM57AQ8TBR7 257 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 PRELID3AQ96N28 172 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 TTTY13Q9BZ97 58 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 RABAC1Q9UI14 185 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 E7EUB6 86 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 ADIPOQQ15848 244 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 LINC00322Q6ZN03 302 aaPredicted RBP9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 C1orf159Q96HA4 380 aa9.92□□□□□ -0.82
SHROOM3-208ENST00000486758 MBD3L4A6NDZ8 208 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 MBD3L3A6NE82 208 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 MBD3L5A6NJ08 208 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 K7EP13 123 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 MBD3L2Q8NHZ7 208 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 AAMDCQ9H7C9 122 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 CSMD2Q7Z408 3487 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 IGF2BP2-AS1Q96M15 143 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 TMEM160Q9NX00 188 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 IGHV3-49A0A0A0MS15 119 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 TCRAP04437 139 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 EVI2AP22794 236 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 MEF2CQ06413 473 aaPredicted RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 CHCHD1Q96BP2 118 aaKnown RBP9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 LINC00312Q9Y6C7 94 aa9.91□□□□□ -0.82
SHROOM3-208ENST00000486758 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 J3QR89 54 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 IGLV1-44P01699 117 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 PPIAL4GP0DN37 164 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 WT1-ASQ06250 92 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 C2orf83Q53S99 150 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms