RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CENPVQ7Z7K6 275 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-216ENST00000486741 RAB37Q96AX2 223 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 SLC25A2Q9BXI2 301 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 KMT2EQ8IZD2 1858 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 CGB3P0DN86 165 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 CGB7P0DN87 165 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
HMGN1-216ENST00000486741 EPG5Q9HCE0 2579 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 IGLC7A0M8Q6 106 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 RBPMS2Q6ZRY4 209 aaKnown RBP10.57□□□□□ -0.72
HMGN1-216ENST00000486741 NRN1Q9NPD7 142 aa10.57□□□□□ -0.72
HMGN1-216ENST00000486741 VWC2Q2TAL6 325 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 KLK15Q9H2R5 256 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 HAX1O00165 279 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 GPX1P07203 203 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 P0C879 139 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 KCNS1Q96KK3 526 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 FREM2Q5SZK8 3169 aa10.56□□□□□ -0.72
HMGN1-216ENST00000486741 BTF3P20290 206 aaKnown RBP10.55□□□□□ -0.72
HMGN1-216ENST00000486741 ZNF562Q6V9R5 426 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 FNDC10F2Z333 226 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 M0R381 172 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 ACTL10Q5JWF8 245 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 C11orf44Q8N8P7 122 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 C18orf15Q96N68 181 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 RNF5Q99942 180 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 KLF2Q9Y5W3 355 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-216ENST00000486741 ATP6V0E1O15342 81 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 FAM106AQ4KMX7 169 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 TSKUQ8WUA8 353 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 A0A1W2PS18 150 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 PRB1P04280 392 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 ZNF138P52744 262 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 LAMTOR2Q9Y2Q5 125 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
HMGN1-216ENST00000486741 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 C17orf77Q96MU5 243 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 APOHP02749 345 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-216ENST00000486741 AP5S1Q9NUS5 200 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 K7EN84 100 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 SNAI2O43623 268 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 ZNF841Q6ZN19 808 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 NIT1Q86X76 327 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 HSPB8Q9UJY1 196 aa10.54□□□□□ -0.72
HMGN1-216ENST00000486741 A8MWP6 167 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 IGHV2-5P01817 119 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 CR1LQ2VPA4 569 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 NRGNQ92686 78 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 IFITM10A6NMD0 228 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 LCNL1Q6ZST4 164 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 SMIM12Q96EX1 92 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 ADAMTS20P59510 1910 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 FBLN7Q53RD9 439 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 PHLDA3Q9Y5J5 127 aa10.53□□□□□ -0.72
HMGN1-216ENST00000486741 DSPP15924 2871 aaKnown RBP10.53□□□□□ -0.72
HMGN1-216ENST00000486741 NUDT3O95989 172 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 FXYD7P58549 80 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 LCN12Q6JVE5 192 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 LINC00614P0C842 121 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 NMUP48645 174 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 RAB9AP51151 201 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 CDSNQ15517 529 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 ABCA12Q86UK0 2595 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 PAX8Q06710 450 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
HMGN1-216ENST00000486741 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 PATE2Q6UY27 113 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 FER1L6-AS1Q8NA97 138 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 DYNLRB2Q8TF09 96 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 PRELID3AQ96N28 172 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 PKD1L2Q7Z442 2459 aa10.52□□□□□ -0.73
HMGN1-216ENST00000486741 MOB4Q9Y3A3 225 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 IGHV3OR16-12A0A075B7B8 117 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 ID1P41134 155 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 MCRIP2Q9BUT9 160 aaKnown RBP10.51□□□□□ -0.73
HMGN1-216ENST00000486741 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-216ENST00000486741 SHANK2-AS3Q9BTD1 123 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 V9GYV3 84 aa10.51□□□□□ -0.73
HMGN1-216ENST00000486741 UBE2E1P51965 193 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 IGHV2-70DA0A0C4DH43 119 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 IGLV1-47P01700 117 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
HMGN1-216ENST00000486741 ERCC8Q13216 396 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 OOSP1A8MZH6 123 aa10.5□□□□□ -0.73
HMGN1-216ENST00000486741 FABP5P3A8MUU1 101 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms