RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SLC50A1Q9BRV3 221 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 SLC25A2Q9BXI2 301 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 ACTR3CQ9C0K3 210 aaPredicted RBP8.5□□□□□ -1.05
NUP50-216ENST00000486184 SRD5A3Q9H8P0 318 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 TMEM14CQ9P0S9 112 aa8.5□□□□□ -1.05
NUP50-216ENST00000486184 SEC11BP0C7V7 166 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 IGHV4-30-4P0DP06 118 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 UBE2L3P68036 154 aaKnown RBP8.49□□□□□ -1.05
NUP50-216ENST00000486184 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
NUP50-216ENST00000486184 SLC51BQ86UW2 128 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 APRG1Q8IVJ8 170 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 C9orf62Q8N4C0 152 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 FAM24BQ8N5W8 94 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 STOML3Q8TAV4 291 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 PAXXQ9BUH6 204 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 WFDC10AQ9H1F0 79 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 OR51M1Q9H341 326 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 HRH4Q9H3N8 390 aa8.49□□□□□ -1.05
NUP50-216ENST00000486184 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
NUP50-216ENST00000486184 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
NUP50-216ENST00000486184 OR10J4P0C629 311 aa8.48□□□□□ -1.05
NUP50-216ENST00000486184 PYYP10082 97 aa8.48□□□□□ -1.05
NUP50-216ENST00000486184 HIST1H1EP10412 219 aaKnown RBP8.48□□□□□ -1.05
NUP50-216ENST00000486184 NKX2-5P52952 324 aaPredicted RBP8.48□□□□□ -1.05
NUP50-216ENST00000486184 PQLC2Q6ZP29 291 aa8.48□□□□□ -1.05
NUP50-216ENST00000486184 BLNKQ8WV28 456 aa8.48□□□□□ -1.05
NUP50-216ENST00000486184 RPRMQ9NS64 109 aa8.48□□□□□ -1.05
NUP50-216ENST00000486184 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 H3BTX0 84 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 SOCS3O14543 225 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 HMGB3O15347 200 aaKnown RBP8.47□□□□□ -1.05
NUP50-216ENST00000486184 IGLC2P0DOY2 106 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 PSG9Q00887 426 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 STHQ8IWL8 128 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 IQCF2Q8IXL9 164 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
NUP50-216ENST00000486184 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 TMED6Q8WW62 240 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 FAM167A-AS1Q96KT0 104 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 AAMDCQ9H7C9 122 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 CLEC5AQ9NY25 188 aa8.47□□□□□ -1.05
NUP50-216ENST00000486184 TRBV19A0A075B6N1 114 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 A8MZ25 164 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 H3BQ15 152 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 ZNF253O75346 499 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 CXorf1O96002 111 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 NBEAP1P0C6P0 100 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 FRMD6-AS1P0C7T7 363 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 PDE6HQ13956 83 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 ACTL10Q5JWF8 245 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 RNF182Q8N6D2 247 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 C17orf77Q96MU5 243 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 ZNF331Q9NQX6 463 aaPredicted RBP8.46□□□□□ -1.06
NUP50-216ENST00000486184 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 ZNF586Q9NXT0 402 aa8.46□□□□□ -1.06
NUP50-216ENST00000486184 LOC102724200A0A096LPH7 203 aaPredicted RBP8.45□□□□□ -1.06
NUP50-216ENST00000486184 SLC17A3O00476 420 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 EIF3GO75821 320 aaKnown RBP eCLIP8.45□□□□□ -1.06
NUP50-216ENST00000486184 STAG3L2P0CL84 134 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 STAG3L3P0CL85 134 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 ARL14EPLP0DKL9 152 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 ZNF124Q15973 351 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 IGFL4Q6B9Z1 124 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 FAM213BQ8TBF2 198 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 FXYD5Q96DB9 178 aa8.45□□□□□ -1.06
NUP50-216ENST00000486184 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 KNCNA6PVL3 124 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 RPL35AP18077 110 aaKnown RBP8.44□□□□□ -1.06
NUP50-216ENST00000486184 RAB5CP51148 216 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 APOC4P55056 127 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 PSG3Q16557 428 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 FOXI2Q6ZQN5 318 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 TMEM167BQ9NRX6 74 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 PRELID1Q9Y255 219 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
NUP50-216ENST00000486184 AGRNO00468 2067 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 BOLA2-SMG1P6H3BVE0 249 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 HLA-DMBP28068 263 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 GCHFRP30047 84 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 RANP62826 216 aaKnown RBP8.43□□□□□ -1.06
NUP50-216ENST00000486184 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 RPUSD4Q96CM3 377 aaKnown RBP8.43□□□□□ -1.06
NUP50-216ENST00000486184 SAT2Q96F10 170 aaPredicted RBP8.43□□□□□ -1.06
NUP50-216ENST00000486184 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 PHYHIPLQ96FC7 376 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 C20orf173Q96LM9 149 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 B9D2Q9BPU9 175 aa8.43□□□□□ -1.06
NUP50-216ENST00000486184 SAV1Q9H4B6 383 aaPredicted RBP8.43□□□□□ -1.06
NUP50-216ENST00000486184 PPP1R14DQ9NXH3 145 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms