RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SLC51BQ86UW2 128 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 BAP18Q8IXM2 172 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 LRRC20Q8TCA0 184 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 GATAD1Q8WUU5 269 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 BLNKQ8WV28 456 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 TMED6Q8WW62 240 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 GLMPQ8WWB7 406 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 C8orf49Q96NF6 230 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 PSMG3Q9BT73 122 aaPredicted RBP4.23□□□□□ -1.73
COPS3-208ENST00000486032 SHANK2-AS3Q9BTD1 123 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
COPS3-208ENST00000486032 FUT9Q9Y231 359 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 TIMM9Q9Y5J7 89 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
COPS3-208ENST00000486032 HELTA6NFD8 242 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 OR7C2O60412 319 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 MBP02144 154 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 CD7P09564 240 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 OR10J4P0C629 311 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 ZNF688P0C7X2 276 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 SPP1P10451 314 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 CDC34P49427 236 aaPredicted RBP4.22□□□□□ -1.73
COPS3-208ENST00000486032 FGF8P55075 233 aaPredicted RBP4.22□□□□□ -1.73
COPS3-208ENST00000486032 CD81P60033 236 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 KRTAP10-11P60412 298 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 RHOBP62745 196 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 SERF2P84101 59 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 TMEM41BQ5BJD5 291 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 FAM74A1Q5RGS3 127 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 FAM90A2PQ658T7 463 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 LCN15Q6UWW0 184 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 BPIFA4PQ86YQ2 179 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 FAM24BQ8N5W8 94 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 OR2K2Q8NGT1 345 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 FAM213BQ8TBF2 198 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 C16orf92Q96LL3 132 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 LINC00052Q96N35 136 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 MRPL32Q9BYC8 188 aaKnown RBP4.22□□□□□ -1.73
COPS3-208ENST00000486032 ACTR3CQ9C0K3 210 aaPredicted RBP4.22□□□□□ -1.73
COPS3-208ENST00000486032 WFDC10AQ9H1F0 79 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 MS4A6AQ9H2W1 248 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 OR51M1Q9H341 326 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 RPRMQ9NS64 109 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 SIGLEC8Q9NYZ4 499 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 ZNF256Q9Y2P7 627 aaPredicted RBP4.22□□□□□ -1.73
COPS3-208ENST00000486032 SMAD5-AS1Q9Y6J3 95 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
COPS3-208ENST00000486032 TRAV25A0A0B4J276 109 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 OR4C46A6NHA9 309 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 TSPAN4O14817 238 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 SEC11BP0C7V7 166 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 RPL7P18124 248 aaKnown RBP4.21□□□□□ -1.74
COPS3-208ENST00000486032 HLA-DMBP28068 263 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 FHITP49789 147 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 TAS2R45P59539 299 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 DEFB131AP59861 70 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 UBE2L3P68036 154 aaKnown RBP4.21□□□□□ -1.74
COPS3-208ENST00000486032 BEAN1Q3B7T3 259 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 KHDC3LQ587J8 217 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 DEFB121Q5J5C9 76 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 PSMG4Q5JS54 123 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 C1orf194Q5T5A4 169 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 EIF5AL1Q6IS14 154 aaKnown RBP4.21□□□□□ -1.74
COPS3-208ENST00000486032 ALKAL2Q6UX46 152 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 SSX7Q7RTT5 188 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 GTSCR1Q86UQ5 136 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 APRG1Q8IVJ8 170 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 STOML3Q8TAV4 291 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 RAB24Q969Q5 203 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 GPR82Q96P67 336 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 SPAG8Q99932 426 aaPredicted RBP4.21□□□□□ -1.74
COPS3-208ENST00000486032 SLC25A2Q9BXI2 301 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 NRN1Q9NPD7 142 aa4.21□□□□□ -1.74
COPS3-208ENST00000486032 CTXND1A0A1B0GTU2 59 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 MAP1LC3B2A6NCE7 125 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 H3BQ15 152 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 K7EQG2 157 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 CD5P06127 495 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 ARL14EPLP0DKL9 152 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 ID1P41134 155 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 DEFB1P60022 68 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 UBE2G2P60604 165 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 ZNF726P1Q15940 193 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 RPP25LQ8N5L8 163 aaKnown RBP4.2□□□□□ -1.74
COPS3-208ENST00000486032 DEFB125Q8N687 156 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 RNF182Q8N6D2 247 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 ZNF738Q8NE65 137 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 RNF141Q8WVD5 230 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 PCNPQ8WW12 178 aaKnown RBP4.2□□□□□ -1.74
COPS3-208ENST00000486032 FAM167A-AS1Q96KT0 104 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 MAP1LC3BQ9GZQ8 125 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 AURKAIP1Q9NWT8 199 aaPredicted RBP4.2□□□□□ -1.74
COPS3-208ENST00000486032 ZNF586Q9NXT0 402 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 ZMAT5Q9UDW3 170 aaKnown RBP4.2□□□□□ -1.74
COPS3-208ENST00000486032 RPH3ALQ9UNE2 315 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 RNF24Q9Y225 148 aa4.2□□□□□ -1.74
COPS3-208ENST00000486032 KNCNA6PVL3 124 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms