RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZNF546Q86UE3 836 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 ZNF709Q8N972 641 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 LINC00476Q8WZB0 136 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 C16orf92Q96LL3 132 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 LINC00052Q96N35 136 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 NMES1Q9C002 83 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 ARV1Q9H2C2 271 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 SLC25A22Q9H936 323 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 GPN1Q9HCN4 374 aaPredicted RBP5.05□□□□□ -1.6
VPS50-218ENST00000485994 DNAJC4Q9NNZ3 241 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 DOK5Q9P104 306 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 XCL2Q9UBD3 114 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 WDR83OSQ9Y284 106 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
VPS50-218ENST00000485994 TRAV8-2A0A0B4J237 113 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 FAM24AA6NFZ4 105 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 FAM25EA8MYX2 175 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 INMT-MINDY4F8WBC2 141 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 CCSO14618 274 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 MPDU1O75352 247 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 RLN2P04090 185 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 OR5G3P0C626 314 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 CXCL3P19876 107 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
VPS50-218ENST00000485994 RRAS2P62070 204 aaPredicted RBP5.04□□□□□ -1.6
VPS50-218ENST00000485994 HBG1P69891 147 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 HBG2P69892 147 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 SLC38A11Q08AI6 406 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 RAB32Q13637 225 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 OXA1LQ15070 435 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 PSG3Q16557 428 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 FAM78BQ5VT40 261 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 AMTNQ6UX39 209 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 Q6ZRG5 221 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 BPIFA4PQ86YQ2 179 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 TMEM252Q8N6L7 170 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 ENKURQ8TC29 256 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 C2CD4CQ8TF44 421 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 TMEM37Q8WXS4 190 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 ARL6Q9H0F7 186 aa5.04□□□□□ -1.6
VPS50-218ENST00000485994 LSM5Q9Y4Y9 91 aaKnown RBP5.04□□□□□ -1.6
VPS50-218ENST00000485994 TRAV10A0A0B4J240 114 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 TEX48A0A1B0GUV7 120 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 PTTG1O95997 202 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 CAMLGP49069 296 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 BCAP31P51572 246 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 CAV2P51636 162 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 DEFA1P59665 94 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 DEFA3P59666 94 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 PMS2P11Q13670 270 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 LINC00305Q7Z4B0 112 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 OR4B1Q8NGF8 309 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 OR1L4Q8NGR5 311 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 SAT2Q96F10 170 aaPredicted RBP5.03□□□□□ -1.6
VPS50-218ENST00000485994 IGF2BP2-AS1Q96M15 143 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 UHRF2Q96PU4 802 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 MGST2Q99735 147 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 SLC50A1Q9BRV3 221 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 RNF126Q9BV68 326 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 SCRT1Q9BWW7 348 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 SLC25A31Q9H0C2 315 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 ZNF331Q9NQX6 463 aaPredicted RBP5.03□□□□□ -1.6
VPS50-218ENST00000485994 UQCC1Q9NVA1 299 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 APLNQ9ULZ1 77 aa5.03□□□□□ -1.6
VPS50-218ENST00000485994 E5RGE8 158 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 F6UB75 175 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 DEFB4AO15263 64 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 CRXO43186 299 aaPredicted RBP5.02□□□□□ -1.61
VPS50-218ENST00000485994 ZNF253O75346 499 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 CST7O76096 145 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 SPART-AS1P0CW21 52 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 HLA-DMBP28068 263 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 TSPOP30536 169 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 DEFB1P60022 68 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 GUK1Q16774 197 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 C12orf74Q32Q52 190 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 C10orf113Q5VZT2 155 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 LCN15Q6UWW0 184 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 STX12Q86Y82 276 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 OR11H7Q8NGC8 314 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 OR8A1Q8NGG7 326 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 FAM210BQ96KR6 192 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 PFDN5Q99471 154 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 SLC35B3Q9H1N7 401 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 GOLT1BQ9Y3E0 138 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 RFNGQ9Y644 331 aa5.02□□□□□ -1.61
VPS50-218ENST00000485994 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
VPS50-218ENST00000485994 IGSF23A1L1A6 192 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 COX7A2P2O60397 106 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 LY6G6CO95867 125 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 HBE1P02100 147 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 IGLC2P0DOY2 106 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 CNN1P51911 297 aaKnown RBP5.01□□□□□ -1.61
VPS50-218ENST00000485994 NHLH2Q02577 135 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 BAXQ07812 192 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 PDE6HQ13956 83 aa5.01□□□□□ -1.61
VPS50-218ENST00000485994 OPCMLQ14982 345 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms