RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TRAV12-2	A0A075B6T6	113 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	PMS2P5	A8MQ11	134 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550		H3BRN7	92 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	HYPM	O75409	117 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	CDK2AP2	O75956	126 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	DUSP14	O95147	198 aa	Known RBP	7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	SNRPC	P09234	159 aa	Known RBP	7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	METTL15P1	P0C7V9	234 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	LINC00869	P0C866	280 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	UBE2M	P61081	183 aa	Known RBP	7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	DAD1	P61803	113 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	C4orf46	Q504U0	113 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	ZNF738	Q8NE65	137 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	LRRC20	Q8TCA0	184 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	GPR82	Q96P67	336 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	SHANK2-AS3	Q9BTD1	123 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	RBM38	Q9H0Z9	239 aa	Known RBP	7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	GSKIP	Q9P0R6	139 aa		7.49	□□□□□ -1.21
HMGN1-215	ENST00000485550	TEX48	A0A1B0GUV7	120 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	NAP1L6	A6NFF2	107 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	CRX	O43186	299 aa	Predicted RBP	7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	AZU1	P20160	251 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	S100A7	P31151	101 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	RHOB	P62745	196 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	HIST1H1A	Q02539	215 aa	Predicted RBP	7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	FCN2	Q15485	313 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	IAH1	Q2TAA2	248 aa	Predicted RBP	7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	TMEM88	Q6PEY1	159 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	PATE2	Q6UY27	113 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550		Q6ZR54	194 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	BAP18	Q8IXM2	172 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550		Q8N1X5	172 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	SMIM8	Q96KF7	97 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550	ARL6	Q9H0F7	186 aa		7.48	□□□□□ -1.21
HMGN1-215	ENST00000485550		A8MTW9	85 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	INS	P01308	110 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	DEFB130B	P0DP73	79 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	DEFB130A	P0DP74	79 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	HTN1	P15515	57 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	RPL7	P18124	248 aa	Known RBP	7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	DLK1	P80370	383 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	SLC38A11	Q08AI6	406 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	OXA1L	Q15070	435 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	SOHLH1	Q5JUK2	328 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	TMEM14EP	Q6UXP3	125 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	OR10P1	Q8NGE3	313 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	FAM210B	Q96KR6	192 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	LINC01587	Q99440	93 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	SDHC	Q99643	169 aa	Predicted RBP	7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	NPVF	Q9HCQ7	196 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	SCRT2	Q9NQ03	307 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	PPP1R14D	Q9NXH3	145 aa		7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	APOB	P04114	4563 aa	Known RBP	7.47	□□□□□ -1.21
HMGN1-215	ENST00000485550	CENPX	A8MT69	81 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550		H3BTX0	84 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	CCS	O14618	274 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	CXCL3	P19876	107 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	BTC	P35070	178 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	SELENOT	P62341	195 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	ARL16	Q0P5N6	197 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	PSG3	Q16557	428 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	C1orf134	Q5TEV5	83 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	TEPP	Q6URK8	271 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	OR8A1	Q8NGG7	326 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	ARV1	Q9H2C2	271 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550	MGAT4C	Q9UBM8	478 aa		7.46	□□□□□ -1.22
HMGN1-215	ENST00000485550		F5H768	121 aa		7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550	BOLA2-SMG1P6	H3BVE0	249 aa		7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550	GOSR2	O14653	212 aa		7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550	EIF4EBP3	O60516	100 aa	Predicted RBP	7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550	PLP1	P60201	277 aa		7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550	RPUSD4	Q96CM3	377 aa	Known RBP	7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550	RCL1	Q9Y2P8	373 aa	Known RBP	7.45	□□□□□ -1.22
HMGN1-215	ENST00000485550		A0A087X0K7	114 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	C7orf66	A4D0T2	115 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	LYRM9	A8MSI8	78 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	FAM25E	A8MYX2	175 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	AGPAT2	O15120	278 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	NUDT3	O95989	172 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	MBP	P02686	304 aa	Predicted RBP	7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	IL7	P13232	177 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	RNF212	Q495C1	297 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	LINC00305	Q7Z4B0	112 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	MITD1	Q8WV92	249 aa		7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	PARD6G	Q9BYG4	376 aa	Predicted RBP	7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	LSM5	Q9Y4Y9	91 aa	Known RBP	7.44	□□□□□ -1.22
HMGN1-215	ENST00000485550	PLAC8L1	A1L4L8	177 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	PRAC2	D3DTV9	90 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	ZNF701	M0R085	212 aa	Predicted RBP	7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	MRPS12	O15235	138 aa	Known RBP	7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	TSC22D2	O75157	780 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	BCAP31	P51572	246 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	TAS2R30	P59541	319 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	B2M	P61769	119 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	KIR3DS1	Q14943	382 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	MORN5	Q5VZ52	161 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	S100A7A	Q86SG5	101 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	MGST2	Q99735	147 aa		7.43	□□□□□ -1.22
HMGN1-215	ENST00000485550	ATG101	Q9BSB4	218 aa		7.43	□□□□□ -1.22

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