RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TMEM14EPQ6UXP3 125 aa13.49□□□□□ -0.25
COL27A1-205ENST00000485397 SRRQ9GZT4 340 aa13.49□□□□□ -0.25
COL27A1-205ENST00000485397 NDUFB6O95139 128 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 ATP5G1P05496 136 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 SNRPCP09234 159 aaKnown RBP13.48□□□□□ -0.25
COL27A1-205ENST00000485397 ATP5G3P48201 142 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 TAS2R60P59551 318 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 TNP2Q05952 138 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 SLC38A11Q08AI6 406 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 BAK1Q16611 211 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 ZNRF2Q8NHG8 242 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 RPUSD4Q96CM3 377 aaKnown RBP13.48□□□□□ -0.25
COL27A1-205ENST00000485397 ARV1Q9H2C2 271 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 NPVFQ9HCQ7 196 aa13.48□□□□□ -0.25
COL27A1-205ENST00000485397 ABCA13Q86UQ4 5058 aa13.47□□□□□ -0.25
COL27A1-205ENST00000485397 CBY3A6NI87 242 aa13.47□□□□□ -0.25
COL27A1-205ENST00000485397 SCGB1D2O95969 90 aa13.47□□□□□ -0.25
COL27A1-205ENST00000485397 OR4E1P0C645 316 aa13.47□□□□□ -0.25
COL27A1-205ENST00000485397 ANXA7P20073 488 aaKnown RBP13.47□□□□□ -0.25
COL27A1-205ENST00000485397 TMEM256Q8N2U0 113 aa13.47□□□□□ -0.25
COL27A1-205ENST00000485397 KRTAP4-5Q9BYR2 181 aa13.47□□□□□ -0.25
COL27A1-205ENST00000485397 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 NAP1L6A6NFF2 107 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 INPP1P49441 399 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 ARL16Q0P5N6 197 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 KIR3DS1Q14943 382 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 TEPPQ6URK8 271 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 OR10P1Q8NGE3 313 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 RNF141Q8WVD5 230 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 C16orf74Q96GX8 76 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 MGAT4CQ9UBM8 478 aa13.46□□□□□ -0.25
COL27A1-205ENST00000485397 FNDC10F2Z333 226 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 K7EPK0 472 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 CDKN1BP46527 198 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 IAH1Q2TAA2 248 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-205ENST00000485397 SPANXN2Q5MJ10 180 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 TRIQKQ629K1 86 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 S100A7AQ86SG5 101 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 PARD6GQ9BYG4 376 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-205ENST00000485397 NOP10Q9NPE3 64 aaKnown RBP13.45□□□□□ -0.26
COL27A1-205ENST00000485397 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 TIMM8BQ9Y5J9 83 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-205ENST00000485397 HSPG2P98160 4391 aa13.45□□□□□ -0.26
COL27A1-205ENST00000485397 C4orf46Q504U0 113 aa13.44□□□□□ -0.26
COL27A1-205ENST00000485397 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
COL27A1-205ENST00000485397 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
COL27A1-205ENST00000485397 ZBTB8BQ8NAP8 495 aaPredicted RBP13.44□□□□□ -0.26
COL27A1-205ENST00000485397 ZNF331Q9NQX6 463 aaPredicted RBP13.44□□□□□ -0.26
COL27A1-205ENST00000485397 GSKIPQ9P0R6 139 aa13.44□□□□□ -0.26
COL27A1-205ENST00000485397 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
COL27A1-205ENST00000485397 PRAC2D3DTV9 90 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 H3BTX0 84 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 GOSR2O14653 212 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 AGPAT2O15120 278 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 TSC22D2O75157 780 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 CCL18P55774 89 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 LCN15Q6UWW0 184 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 RNASE8Q8TDE3 154 aaKnown RBP13.43□□□□□ -0.26
COL27A1-205ENST00000485397 LRP1BQ9NZR2 4599 aa13.43□□□□□ -0.26
COL27A1-205ENST00000485397 H7BYZ3 331 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 CXCL2P19875 107 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 BTCP35070 178 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 TAS2R30P59541 319 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 PXDC1Q5TGL8 231 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 ZNF493Q6ZR52 646 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 ZNF546Q86UE3 836 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 TMEM263Q8WUH6 116 aaKnown RBP13.42□□□□□ -0.26
COL27A1-205ENST00000485397 SDHCQ99643 169 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-205ENST00000485397 SLC50A1Q9BRV3 221 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 RBM38Q9H0Z9 239 aaKnown RBP13.42□□□□□ -0.26
COL27A1-205ENST00000485397 RNF24Q9Y225 148 aa13.42□□□□□ -0.26
COL27A1-205ENST00000485397 C16orf90A8MZG2 172 aa13.41□□□□□ -0.26
COL27A1-205ENST00000485397 SLC17A3O00476 420 aa13.41□□□□□ -0.26
COL27A1-205ENST00000485397 CLINT1Q14677 625 aa13.41□□□□□ -0.26
COL27A1-205ENST00000485397 TMEM37Q8WXS4 190 aa13.41□□□□□ -0.26
COL27A1-205ENST00000485397 MGST2Q99735 147 aa13.41□□□□□ -0.26
COL27A1-205ENST00000485397 C7orf66A4D0T2 115 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 MBPP02686 304 aaPredicted RBP13.4□□□□□ -0.26
COL27A1-205ENST00000485397 OR5I1Q13606 314 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 OPCMLQ14982 345 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 GFI1BQ5VTD9 330 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 SSX7Q7RTT5 188 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 BPIFA4PQ86YQ2 179 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 MITD1Q8WV92 249 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 GGACTQ9BVM4 153 aa13.4□□□□□ -0.26
COL27A1-205ENST00000485397 LINC00612Q8N6U2 182 aa13.39□□□□□ -0.27
COL27A1-205ENST00000485397 OR10J6PQ8NGY7 276 aa13.39□□□□□ -0.27
COL27A1-205ENST00000485397 C20orf144Q9BQM9 153 aa13.39□□□□□ -0.27
COL27A1-205ENST00000485397 TRAV26-1A0A087WT03 109 aa13.38□□□□□ -0.27
COL27A1-205ENST00000485397 CENPXA8MT69 81 aa13.38□□□□□ -0.27
COL27A1-205ENST00000485397 H3BQ15 152 aa13.38□□□□□ -0.27
COL27A1-205ENST00000485397 J3KRW8 73 aa13.38□□□□□ -0.27
COL27A1-205ENST00000485397 CCSO14618 274 aa13.38□□□□□ -0.27
COL27A1-205ENST00000485397 C10orf113Q5VZT2 155 aa13.38□□□□□ -0.27
COL27A1-205ENST00000485397 TRAV5A0A0B4J249 113 aa13.37□□□□□ -0.27
COL27A1-205ENST00000485397 A0A0J9YY99 117 aa13.37□□□□□ -0.27
COL27A1-205ENST00000485397 IGLC2P0DOY2 106 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms