RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 EBLN2Q6P2I7 272 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-213ENST00000485080 SAT2Q96F10 170 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-213ENST00000485080 SLC50A1Q9BRV3 221 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 MRPL32Q9BYC8 188 aaKnown RBP12.99□□□□□ -0.33
SREBF1-213ENST00000485080 ZNF331Q9NQX6 463 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-213ENST00000485080 TNFSF18Q9UNG2 199 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 TIMM9Q9Y5J7 89 aa12.99□□□□□ -0.33
SREBF1-213ENST00000485080 TRAV5A0A0B4J249 113 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 ZNF253O75346 499 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 FAM78BQ5VT40 261 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 CSNK1G2-AS1Q8NCQ2 148 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 C1QTNF4Q9BXJ3 329 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
SREBF1-213ENST00000485080 RNF222A6NCQ9 220 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 C3orf84H3BNL1 204 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 H3BQ15 152 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 C4BPBP20851 252 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 DEFB1P60022 68 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 PSG3Q16557 428 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 MUC7Q8TAX7 377 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 FAM167A-AS1Q96KT0 104 aa12.97□□□□□ -0.33
SREBF1-213ENST00000485080 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
SREBF1-213ENST00000485080 PDE6HQ13956 83 aa12.96□□□□□ -0.33
SREBF1-213ENST00000485080 FFAR4Q5NUL3 377 aa12.96□□□□□ -0.33
SREBF1-213ENST00000485080 RNF182Q8N6D2 247 aa12.96□□□□□ -0.33
SREBF1-213ENST00000485080 LRRC20Q8TCA0 184 aa12.96□□□□□ -0.33
SREBF1-213ENST00000485080 FUT9Q9Y231 359 aa12.96□□□□□ -0.33
SREBF1-213ENST00000485080 DYNC2H1Q8NCM8 4307 aaKnown RBP12.95□□□□□ -0.34
SREBF1-213ENST00000485080 FXYD6-FXYD2A0A087WZ82 144 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 ZNF705EA8MWA4 302 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-213ENST00000485080 F6UB75 175 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 DUSP14O95147 198 aaKnown RBP12.95□□□□□ -0.34
SREBF1-213ENST00000485080 IGFL4Q6B9Z1 124 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 MIR17HGQ75NE6 70 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 OR2G3Q8NGZ4 309 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 RARRES2Q99969 163 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 ZNF586Q9NXT0 402 aa12.95□□□□□ -0.34
SREBF1-213ENST00000485080 KMT2CQ8NEZ4 4911 aaKnown RBP12.94□□□□□ -0.34
SREBF1-213ENST00000485080 TRBV19A0A075B6N1 114 aa12.94□□□□□ -0.34
SREBF1-213ENST00000485080 PSG9Q00887 426 aa12.94□□□□□ -0.34
SREBF1-213ENST00000485080 AMTNQ6UX39 209 aa12.94□□□□□ -0.34
SREBF1-213ENST00000485080 ZNF738Q8NE65 137 aa12.94□□□□□ -0.34
SREBF1-213ENST00000485080 OR11H2Q8NH07 326 aa12.94□□□□□ -0.34
SREBF1-213ENST00000485080 IL17DQ8TAD2 202 aa12.94□□□□□ -0.34
SREBF1-213ENST00000485080 PSMG3Q9BT73 122 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-213ENST00000485080 SLC17A3O00476 420 aa12.93□□□□□ -0.34
SREBF1-213ENST00000485080 RHOBP62745 196 aa12.93□□□□□ -0.34
SREBF1-213ENST00000485080 OR4B1Q8NGF8 309 aa12.93□□□□□ -0.34
SREBF1-213ENST00000485080 OR8A1Q8NGG7 326 aa12.93□□□□□ -0.34
SREBF1-213ENST00000485080 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
SREBF1-213ENST00000485080 C11orf68Q9H3H3 251 aaKnown RBP12.93□□□□□ -0.34
SREBF1-213ENST00000485080 M6PRP20645 277 aa12.92□□□□□ -0.34
SREBF1-213ENST00000485080 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
SREBF1-213ENST00000485080 CNN1P51911 297 aaKnown RBP12.92□□□□□ -0.34
SREBF1-213ENST00000485080 SERF2P84101 59 aa12.92□□□□□ -0.34
SREBF1-213ENST00000485080 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-213ENST00000485080 RPUSD4Q96CM3 377 aaKnown RBP12.92□□□□□ -0.34
SREBF1-213ENST00000485080 OR51M1Q9H341 326 aa12.92□□□□□ -0.34
SREBF1-213ENST00000485080 TENM2Q9NT68 2774 aa12.92□□□□□ -0.34
SREBF1-213ENST00000485080 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 TAAR5O14804 337 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 NDUFB4O95168 129 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 AMBPP02760 352 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 PYYP10082 97 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-213ENST00000485080 Q6ZNX1 250 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 FXYD5Q96DB9 178 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
SREBF1-213ENST00000485080 BORCS7-ASMTA0A0B4J1R7 106 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 A0A0J9YWU9 116 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 H3BTX0 84 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 SNRPCP09234 159 aaKnown RBP12.9□□□□□ -0.34
SREBF1-213ENST00000485080 NBEAP1P0C6P0 100 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 MIFP14174 115 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 ATP6V0CP27449 155 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 TAS2R45P59539 299 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 ZNF345Q14585 488 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 GNPNAT1Q96EK6 184 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-213ENST00000485080 NEU1Q99519 415 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 PAXXQ9BUH6 204 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 RFNGQ9Y644 331 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 X6R8D5 127 aa12.9□□□□□ -0.34
SREBF1-213ENST00000485080 ARPC5O15511 151 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 JTBO76095 146 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 MBP02144 154 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 RPL7L1Q6DKI1 246 aaKnown RBP12.89□□□□□ -0.35
SREBF1-213ENST00000485080 Q8NAQ8 132 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 HSD17B11Q8NBQ5 300 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
SREBF1-213ENST00000485080 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms