RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 GGCTO75223 188 aaKnown RBP12.88□□□□□ -0.35
CTSA-207ENST00000484855 PSG9Q00887 426 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 GOLT1AQ6ZVE7 132 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
CTSA-207ENST00000484855 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
CTSA-207ENST00000484855 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
CTSA-207ENST00000484855 PSMB8P28062 276 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 FAM3BP58499 235 aaPredicted RBP12.87□□□□□ -0.35
CTSA-207ENST00000484855 OSTCQ9NRP0 149 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 SMAD5-AS1Q9Y6J3 95 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 IGHV3-66A0A0C4DH42 116 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 NDUFA4O00483 81 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 IBA57Q5T440 356 aaKnown RBP12.87□□□□□ -0.35
CTSA-207ENST00000484855 SMIM12Q96EX1 92 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 GPR82Q96P67 336 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 V9GYV3 84 aa12.87□□□□□ -0.35
CTSA-207ENST00000484855 FOXL1Q12952 345 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 TLN2Q9Y4G6 2542 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 IGHV3OR16-13A0A075B7E8 117 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 IGHV3-74A0A0B4J1X5 117 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 TMEM89A2RUT3 159 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 CD5LO43866 347 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 LTAP01374 205 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 APOHP02749 345 aaPredicted RBP12.86□□□□□ -0.35
CTSA-207ENST00000484855 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 Q86TA4 180 aa12.86□□□□□ -0.35
CTSA-207ENST00000484855 IGHV3-49A0A0A0MS15 119 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 TRAV8-1A0A0A6YYK1 113 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 K7EQM0 130 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 M0R3E3 92 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 ZNF253O75346 499 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 SLC35B1P78383 322 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 FAM209BQ5JX69 171 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 SRD5A3Q9H8P0 318 aa12.85□□□□□ -0.35
CTSA-207ENST00000484855 A0A087X0K7 114 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 TRGC2P03986 189 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 PRR27Q6MZM9 219 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 BTF3L4Q96K17 158 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 U3KQE9 123 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 CSN1S1P47710 185 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
CTSA-207ENST00000484855 IGLV2-11P01706 119 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 FAM231DQ6ZW35 169 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 PRNTQ86SH4 94 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 TMEM86BQ8N661 226 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 MLST8Q9BVC4 326 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 BIN3Q9NQY0 253 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 YAE1D1Q9NRH1 226 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 ZNF705GA8MUZ8 300 aaPredicted RBP12.83□□□□□ -0.36
CTSA-207ENST00000484855 TYMSP04818 313 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 S100A6P06703 90 aa12.83□□□□□ -0.36
CTSA-207ENST00000484855 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
CTSA-207ENST00000484855 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.36
CTSA-207ENST00000484855 ZNF320A2RRD8 509 aa12.82□□□□□ -0.36
CTSA-207ENST00000484855 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
CTSA-207ENST00000484855 PSG3Q16557 428 aa12.82□□□□□ -0.36
CTSA-207ENST00000484855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.82□□□□□ -0.36
CTSA-207ENST00000484855 TRAV9-1A0A075B6T8 112 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 RPLP1P05386 114 aaKnown RBP12.81□□□□□ -0.36
CTSA-207ENST00000484855 FOXE3Q13461 319 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 TMEM183AQ8IXX5 376 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 SAV1Q9H4B6 383 aaPredicted RBP12.81□□□□□ -0.36
CTSA-207ENST00000484855 ANK3Q12955 4377 aaKnown RBP12.81□□□□□ -0.36
CTSA-207ENST00000484855 SERTM2A0A1B0GWG4 89 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 GATCO43716 136 aaKnown RBP12.81□□□□□ -0.36
CTSA-207ENST00000484855 ELANEP08246 267 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 C16orf54Q6UWD8 224 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 Q8N2B8 174 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 NUDT10Q8NFP7 164 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 NUDT11Q96G61 164 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
CTSA-207ENST00000484855 ARL6IP6Q8N6S5 226 aa12.8□□□□□ -0.36
CTSA-207ENST00000484855 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
CTSA-207ENST00000484855 SONP18583 2426 aaKnown RBP12.8□□□□□ -0.36
CTSA-207ENST00000484855 CHEK1O14757 476 aa12.8□□□□□ -0.36
CTSA-207ENST00000484855 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
CTSA-207ENST00000484855 IGFL4Q6B9Z1 124 aa12.8□□□□□ -0.36
CTSA-207ENST00000484855 GLMPQ8WWB7 406 aa12.8□□□□□ -0.36
CTSA-207ENST00000484855 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
CTSA-207ENST00000484855 MEOX2P50222 304 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 ZFP30Q9Y2G7 519 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
CTSA-207ENST00000484855 DNAJC9-AS1A6NH13 148 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 CA1P00915 261 aaPredicted RBP12.79□□□□□ -0.36
CTSA-207ENST00000484855 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
CTSA-207ENST00000484855 TCL1AP56279 114 aa12.79□□□□□ -0.36
CTSA-207ENST00000484855 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
CTSA-207ENST00000484855 FRZBQ92765 325 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms