RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
HDAC1-209ENST00000484305 CXCL3P19876 107 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 CNN1P51911 297 aaKnown RBP9.28□□□□□ -0.92
HDAC1-209ENST00000484305 H2BFSP57053 126 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 DEFA1P59665 94 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 DEFA3P59666 94 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 HBG1P69891 147 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 HBG2P69892 147 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 NHLH2Q02577 135 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 BAXQ07812 192 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 OPCMLQ14982 345 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 LRRC37A5PQ49AS3 106 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 Q6ZRG5 221 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 ZNF738Q8NE65 137 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 NEU1Q99519 415 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 DNAJC4Q9NNZ3 241 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 OR5AC2Q9NZP5 309 aa9.28□□□□□ -0.92
HDAC1-209ENST00000484305 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 H0YIZ8 118 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
HDAC1-209ENST00000484305 RLN2P04090 185 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 RPL29P47914 159 aaKnown RBP9.27□□□□□ -0.93
HDAC1-209ENST00000484305 PSG3Q16557 428 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 ATP6V1FQ16864 119 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 Q6ZTC4 211 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 ZNF767PQ75MW2 155 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 BPIFA4PQ86YQ2 179 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 OR11H7Q8NGC8 314 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 LRRC20Q8TCA0 184 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 SLC39A9Q9NUM3 307 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 RNF24Q9Y225 148 aa9.27□□□□□ -0.93
HDAC1-209ENST00000484305 SMIM9A6NGZ8 99 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 E5RGE8 158 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 H3BTX0 84 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 M0R2Z0 102 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 FGF7P21781 194 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 B2MP61769 119 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 CYCSP99999 105 aaKnown RBP9.26□□□□□ -0.93
HDAC1-209ENST00000484305 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 C2CD4CQ8TF44 421 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
HDAC1-209ENST00000484305 ZNF331Q9NQX6 463 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-209ENST00000484305 H3BQ15 152 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 SLC17A3O00476 420 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-209ENST00000484305 SSNA1O43805 119 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 CXCL2P19875 107 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 EMP1P54849 157 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 HIST1H1AQ02539 215 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-209ENST00000484305 SPINK13Q1W4C9 94 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 LCN15Q6UWW0 184 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 OR8A1Q8NGG7 326 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 OR5C1Q8NGR4 320 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 OR1L4Q8NGR5 311 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 THAP6Q8TBB0 222 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 PPP1R1CQ8WVI7 109 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 RPUSD4Q96CM3 377 aaKnown RBP9.25□□□□□ -0.93
HDAC1-209ENST00000484305 SLC25A31Q9H0C2 315 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 RFNGQ9Y644 331 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
HDAC1-209ENST00000484305 TRAV10A0A0B4J240 114 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 IGLL5B9A064 214 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 BAP18Q8IXM2 172 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 SAT2Q96F10 170 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-209ENST00000484305 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 PFDN5Q99471 154 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 SLC50A1Q9BRV3 221 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 NPCDR1Q9BY65 106 aa9.24□□□□□ -0.93
HDAC1-209ENST00000484305 TRAV12-2A0A075B6T6 113 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 MPDU1O75352 247 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 HBE1P02100 147 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 AMBPP02760 352 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 PRM2P04554 102 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 RHOBP62745 196 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 CLINT1Q14677 625 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 LGALS9CQ6DKI2 356 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 ZNF586Q9NXT0 402 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 APLNQ9ULZ1 77 aa9.23□□□□□ -0.93
HDAC1-209ENST00000484305 PRAC2D3DTV9 90 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 BOLA2-SMG1P6H3BVE0 249 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 MPC2O95563 127 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 INSP01308 110 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 TCTAP57738 103 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 RRN3P1Q2M238 152 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 TMEM208Q9BTX3 173 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 DKK2Q9UBU2 259 aa9.22□□□□□ -0.93
HDAC1-209ENST00000484305 IGHV4-4A0A075B6R2 117 aa9.21□□□□□ -0.94
HDAC1-209ENST00000484305 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.94
HDAC1-209ENST00000484305 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
HDAC1-209ENST00000484305 ZNF705GA8MUZ8 300 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms