RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 MZT2BQ6NZ67 158 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 TMEM14EPQ6UXP3 125 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF705AQ6ZN79 300 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-215ENST00000484203 CYP2G1PQ6ZSU1 146 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF546Q86UE3 836 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 CSNK1G2-AS1Q8NCQ2 148 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 S100ZQ8WXG8 99 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 RNF126Q9BV68 326 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 SLC25A22Q9H936 323 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 GSKIPQ9P0R6 139 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 DOK5Q9P104 306 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 HIGD1AQ9Y241 93 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 RFNGQ9Y644 331 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 COX11Q9Y6N1 276 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 A0A0J9YX75 114 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 LINC00854A0A1B0GVQ3 168 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF705FA8MVS1 300 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 H0YIZ8 118 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 SOCS3O14543 225 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 GOSR2O14653 212 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 HBE1P02100 147 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 TCRBP04435 133 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 OR5G3P0C626 314 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 LINC00869P0C866 280 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF705DP0CH99 300 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF705BP0CI00 300 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 CXCL2P19875 107 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ANXA7P20073 488 aaKnown RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 C4BPBP20851 252 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 HLA-DMBP28068 263 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 HBG1P69891 147 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 HBG2P69892 147 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 EWSR1Q01844 656 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 Q6ZRG5 221 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ZBTB8BQ8NAP8 495 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 OR4B1Q8NGF8 309 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 LRRC20Q8TCA0 184 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF431Q8TF32 576 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 RSG1Q9BU20 258 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 SLC25A39Q9BZJ4 359 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-215ENST00000484203 C20orf85Q9H1P6 137 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 XCL2Q9UBD3 114 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 FLVCR2Q9UPI3 526 aa4.45□□□□□ -1.7
PTCD3-215ENST00000484203 ALMS1Q8TCU4 4167 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 A0A087X0K7 114 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 FAM240BA0A1B0GVZ2 78 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 C5orf51A6NDU8 294 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 IGLL5B9A064 214 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 H3BP45 60 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 H3BRN7 92 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 METTL15P1P0C7V9 234 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 RBMY1A1P0DJD3 496 aaKnown RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 RBMY1CP0DJD4 496 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 BTF3P20290 206 aaKnown RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 S100A11P31949 105 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 BTCP35070 178 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 OXA1LQ15070 435 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 RBMY1FQ15415 496 aaKnown RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 GUK1Q16774 197 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 ATP6V1FQ16864 119 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 RRN3P1Q2M238 152 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 FAM78BQ5VT40 261 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 STX12Q86Y82 276 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 BPIFA4PQ86YQ2 179 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 TMEM256Q8N2U0 113 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 C12orf45Q8N5I9 185 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 C2orf50Q96LR7 162 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 IGF2BP2-AS1Q96M15 143 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 PFDN5Q99471 154 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 SDHCQ99643 169 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 SLC50A1Q9BRV3 221 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 TMEM208Q9BTX3 173 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 WDR12Q9GZL7 423 aaKnown RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 SLC25A32Q9H2D1 315 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 GPN1Q9HCN4 374 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-215ENST00000484203 NUDT15Q9NV35 164 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 PPP1R14DQ9NXH3 145 aa4.44□□□□□ -1.7
PTCD3-215ENST00000484203 DEFB131BA0A096LNP1 70 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 C7orf66A4D0T2 115 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 A8MTW9 85 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 FAM25EA8MYX2 175 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 DEFB4AO15263 64 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 PLA2G10O15496 165 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 COX7A2P2O60397 106 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 PRAF2O60831 178 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 MPDU1O75352 247 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 INSP01308 110 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 MBPP02686 304 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-215ENST00000484203 RLN2P04090 185 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 NPSP0C0P6 89 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 P0DMU3 169 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 FAM231AP0DMU4 169 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 FAM231CP0DMU5 169 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 TSPOP30536 169 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 SULT1A1P50225 295 aa4.43□□□□□ -1.7
PTCD3-215ENST00000484203 BCAP31P51572 246 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms