RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 HTN3P15516 51 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 CXCL3P19876 107 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 RHOBP62745 196 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
NUP50-215ENST00000484186 SLC38A11Q08AI6 406 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 ARL16Q0P5N6 197 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 PSG3Q16557 428 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 MZT2BQ6NZ67 158 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 OR8A1Q8NGG7 326 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 C20orf85Q9H1P6 137 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 PPP1R14DQ9NXH3 145 aa6.69□□□□□ -1.34
NUP50-215ENST00000484186 TRAV12-2A0A075B6T6 113 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 LYRM9A8MSI8 78 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 BOLA2-SMG1P6H3BVE0 249 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 L7N2F9 121 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 M0R2N4 97 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 CCSO14618 274 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 TCRBP04435 133 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 CXCL2P19875 107 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 AZU1P20160 251 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 TSPOP30536 169 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 VAMP2P63027 116 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 ASAH1Q13510 395 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 LGALS9BQ3B8N2 356 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 LINC00305Q7Z4B0 112 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 ZNF546Q86UE3 836 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 UBE2DNLQ8IWF7 75 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 BAP18Q8IXM2 172 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
NUP50-215ENST00000484186 HERC2O95714 4834 aa6.68□□□□□ -1.34
NUP50-215ENST00000484186 DNAH17Q9UFH2 4485 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 FAM240BA0A1B0GVZ2 78 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 C5orf51A6NDU8 294 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 FAM25EA8MYX2 175 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 COX7A2P2O60397 106 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 BCAP31P51572 246 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 RNF212Q495C1 297 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 TMEM88Q6PEY1 159 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 LCN15Q6UWW0 184 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 TMEM256Q8N2U0 113 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 ZNF431Q8TF32 576 aaPredicted RBP6.67□□□□□ -1.34
NUP50-215ENST00000484186 TMEM37Q8WXS4 190 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 RPUSD4Q96CM3 377 aaKnown RBP6.67□□□□□ -1.34
NUP50-215ENST00000484186 LINC01587Q99440 93 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 MGST2Q99735 147 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 SLC50A1Q9BRV3 221 aa6.67□□□□□ -1.34
NUP50-215ENST00000484186 ZNF331Q9NQX6 463 aaPredicted RBP6.67□□□□□ -1.34
NUP50-215ENST00000484186 TRAV6A0A075B6T7 132 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 FAM24AA6NFZ4 105 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 RTL8CO15255 209 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 SNRPCP09234 159 aaKnown RBP6.66□□□□□ -1.34
NUP50-215ENST00000484186 DEFB130BP0DP73 79 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 DEFB130AP0DP74 79 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
NUP50-215ENST00000484186 CDKN1BP46527 198 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 CAMLGP49069 296 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 CAV2P51636 162 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 TAS2R60P59551 318 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 DEFA1P59665 94 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 DEFA3P59666 94 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 RAB31Q13636 194 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 C10orf113Q5VZT2 155 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 C12orf45Q8N5I9 185 aaPredicted RBP6.66□□□□□ -1.34
NUP50-215ENST00000484186 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 C2orf50Q96LR7 162 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 SEC22CQ9BRL7 303 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 C11orf1Q9H5F2 150 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 DNAJC4Q9NNZ3 241 aa6.66□□□□□ -1.34
NUP50-215ENST00000484186 DNAH2Q9P225 4427 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 PLAC8L1A1L4L8 177 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 CST7O76096 145 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 H2AFB2P0C5Z0 115 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 HTN1P15515 57 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 PVALBP20472 110 aaPredicted RBP6.65□□□□□ -1.34
NUP50-215ENST00000484186 OPCMLQ14982 345 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 FCN2Q15485 313 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 MORN5Q5VZ52 161 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 Q6ZR54 194 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 Q6ZRG5 221 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 NRARPQ7Z6K4 114 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 NUDT15Q9NV35 164 aa6.65□□□□□ -1.34
NUP50-215ENST00000484186 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 TRAV5A0A0B4J249 113 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 CBY3A6NI87 242 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 PRAC2D3DTV9 90 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 F5H768 121 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 H3BQ15 152 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 H3BTX0 84 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 SLC17A3O00476 420 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 S100A11P31949 105 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
NUP50-215ENST00000484186 SULT1A1P50225 295 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 IFITM3Q01628 133 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 IL15RAQ13261 267 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 VWC2Q2TAL6 325 aa6.64□□□□□ -1.35
NUP50-215ENST00000484186 MIC13Q5XKP0 118 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms