RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SCRT1Q9BWW7 348 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 C1QTNF4Q9BXJ3 329 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 WDR61Q9GZS3 305 aaKnown RBP7.31□□□□□ -1.24
CPSF4-213ENST00000484112 RPRMQ9NS64 109 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 DOK5Q9P104 306 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 MBD2Q9UBB5 411 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 PXMP4Q9Y6I8 212 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 FRAS1Q86XX4 4008 aa7.31□□□□□ -1.24
CPSF4-213ENST00000484112 IFNA5P01569 189 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 HLA-DRB4P13762 266 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 ACTL10Q5JWF8 245 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 MIC13Q5XKP0 118 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 LCN15Q6UWW0 184 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 C16orf92Q96LL3 132 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 HYLS1Q96M11 299 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 UHRF2Q96PU4 802 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 SLC50A1Q9BRV3 221 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 SAV1Q9H4B6 383 aaPredicted RBP7.3□□□□□ -1.24
CPSF4-213ENST00000484112 HLA-DRB4X5D2U9 266 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
CPSF4-213ENST00000484112 H3BMM0 161 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 MRPS12O15235 138 aaKnown RBP7.29□□□□□ -1.24
CPSF4-213ENST00000484112 ZNF253O75346 499 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 NANOS2P60321 138 aaKnown RBP7.29□□□□□ -1.24
CPSF4-213ENST00000484112 ZNF266Q14584 549 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 CLINT1Q14677 625 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 ZNF124Q15973 351 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 EBLN2Q6P2I7 272 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 SCGB1C1Q8TD33 95 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 AQP10Q96PS8 301 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 MRPL32Q9BYC8 188 aaKnown RBP7.29□□□□□ -1.24
CPSF4-213ENST00000484112 HRH4Q9H3N8 390 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 TMEM14CQ9P0S9 112 aa7.29□□□□□ -1.24
CPSF4-213ENST00000484112 DUSP14O95147 198 aaKnown RBP7.28□□□□□ -1.24
CPSF4-213ENST00000484112 CA1P00915 261 aaPredicted RBP7.28□□□□□ -1.24
CPSF4-213ENST00000484112 INO80EQ8NBZ0 244 aaPredicted RBP7.28□□□□□ -1.24
CPSF4-213ENST00000484112 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
CPSF4-213ENST00000484112 LRRC20Q8TCA0 184 aa7.28□□□□□ -1.24
CPSF4-213ENST00000484112 C17orf77Q96MU5 243 aa7.28□□□□□ -1.24
CPSF4-213ENST00000484112 LINC00052Q96N35 136 aa7.28□□□□□ -1.24
CPSF4-213ENST00000484112 RARRES2Q99969 163 aa7.28□□□□□ -1.24
CPSF4-213ENST00000484112 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 A8MTW9 85 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 G3V3Q6 166 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 RGS13O14921 159 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 IGLC2P0DOY2 106 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 NKX2-5P52952 324 aaPredicted RBP7.27□□□□□ -1.25
CPSF4-213ENST00000484112 PDE6HQ13956 83 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 TIMM9Q9Y5J7 89 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 DNAH10Q8IVF4 4471 aa7.27□□□□□ -1.25
CPSF4-213ENST00000484112 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 A0A0J9YX75 114 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 DEFB4AO15263 64 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 AMBPP02760 352 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 FAM78BQ5VT40 261 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 OR2T35Q8NGX2 323 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 C2CD4CQ8TF44 421 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 MRPL53Q96EL3 112 aaKnown RBP7.26□□□□□ -1.25
CPSF4-213ENST00000484112 MFFQ9GZY8 342 aa7.26□□□□□ -1.25
CPSF4-213ENST00000484112 C11orf68Q9H3H3 251 aaKnown RBP7.26□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF331Q9NQX6 463 aaPredicted RBP7.26□□□□□ -1.25
CPSF4-213ENST00000484112 KIAA1109Q2LD37 5005 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF705EA8MWA4 302 aaPredicted RBP7.25□□□□□ -1.25
CPSF4-213ENST00000484112 IGLL5B9A064 214 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 GIG44P09565 113 aaPredicted RBP7.25□□□□□ -1.25
CPSF4-213ENST00000484112 HIST1H1EP10412 219 aaKnown RBP7.25□□□□□ -1.25
CPSF4-213ENST00000484112 MIFP14174 115 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 TAS2R45P59539 299 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 RHOBP62745 196 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 PSG9Q00887 426 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 IFITM2Q01629 132 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 PSG3Q16557 428 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 OR11H2Q8NH07 326 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 SAT2Q96F10 170 aaPredicted RBP7.25□□□□□ -1.25
CPSF4-213ENST00000484112 PSMG3Q9BT73 122 aaPredicted RBP7.25□□□□□ -1.25
CPSF4-213ENST00000484112 TNFSF18Q9UNG2 199 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 FUT9Q9Y231 359 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 PRELID1Q9Y255 219 aa7.25□□□□□ -1.25
CPSF4-213ENST00000484112 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 SMIM9A6NGZ8 99 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 TAAR5O14804 337 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 MBP02144 154 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 C4BPBP20851 252 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 SERF2P84101 59 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 ACOT6Q3I5F7 207 aaPredicted RBP7.24□□□□□ -1.25
CPSF4-213ENST00000484112 GDF5OSQ5U4N7 250 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 MORN5Q5VZ52 161 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 ZNF738Q8NE65 137 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 OR4B1Q8NGF8 309 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 OR2G3Q8NGZ4 309 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 C20orf173Q96LM9 149 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 NEU1Q99519 415 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 SMIM3Q9BZL3 60 aa7.24□□□□□ -1.25
CPSF4-213ENST00000484112 BORCS7-ASMTA0A0B4J1R7 106 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 TRAV5A0A0B4J249 113 aa7.23□□□□□ -1.25
CPSF4-213ENST00000484112 HMSDA8MTL9 139 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms