RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 GRIN2AQ12879 1464 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 OR1I1O60431 355 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 SAA1P0DJI8 122 aaPredicted RBP2.53□□□□□ -2
PTCD3-214ENST00000483925 CSRP1P21291 193 aaKnown RBP2.53□□□□□ -2
PTCD3-214ENST00000483925 DIAPH2-AS1Q14236 149 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 CDK5R1Q15078 307 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 IGFBP7Q16270 282 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 TMEM91Q6ZNR0 172 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
PTCD3-214ENST00000483925 LINC00301Q8NCQ3 95 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 PKMYT1Q99640 499 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 CYTL1Q9NRR1 136 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 CCDC167Q9P0B6 97 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 TPRKBQ9Y3C4 175 aa2.53□□□□□ -2
PTCD3-214ENST00000483925 SOX21Q9Y651 276 aaPredicted RBP2.53□□□□□ -2
PTCD3-214ENST00000483925 KDM5CP41229 1560 aa2.53□□□□□ -2.01
PTCD3-214ENST00000483925 DOCK4Q8N1I0 1966 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 MRC2Q9UBG0 1479 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 FGD6Q6ZV73 1430 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 NUP210LQ5VU65 1888 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 MUC21A0A0G2JKD1 596 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 MUC21A0A140T8X8 626 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 LOC107986453A0A1B0GWG9 222 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 LRCOL1A6NCL2 159 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 F6UZH7 168 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 APODP05090 189 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 PEBP1P30086 187 aaKnown RBP2.52□□□□□ -2.01
PTCD3-214ENST00000483925 PLGLB1Q02325 96 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF345Q14585 488 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF181Q2M3W8 571 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 RNASE10Q5GAN6 216 aaKnown RBP2.52□□□□□ -2.01
PTCD3-214ENST00000483925 TEN1Q86WV5 123 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 OR5D14Q8NGL3 314 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 POP5Q969H6 163 aaKnown RBP2.52□□□□□ -2.01
PTCD3-214ENST00000483925 NIT2Q9NQR4 276 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 BCL9LQ86UU0 1499 aa2.52□□□□□ -2.01
PTCD3-214ENST00000483925 MYOM3Q5VTT5 1437 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 NACAE9PAV3 2078 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 SHANK3Q9BYB0 1731 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 CCNB3Q8WWL7 1395 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 PCM1Q15154 2024 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 IGKV1D-42A0A075B6H8 117 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 TMSB15BA0A087X1C1 80 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 C9orf170A2RU37 121 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 CDC42EP2O14613 210 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 RTL8CO15255 209 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 YPEL1O60688 119 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 CTSGP08311 255 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 MGST1P10620 155 aaKnown RBP2.51□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF791Q3KP31 576 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-214ENST00000483925 GLIPR1L1Q6UWM5 242 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 IZUMO2Q6UXV1 221 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 RPS19BP1Q86WX3 136 aaKnown RBP2.51□□□□□ -2.01
PTCD3-214ENST00000483925 OR4X2Q8NGF9 303 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 DEDD2Q8WXF8 326 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 OR4C12Q96R67 309 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 CXCL16Q9H2A7 254 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 COMMD3Q9UBI1 195 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 FRMPD1Q5SYB0 1578 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 OBSL1O75147 1896 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 WDR90Q96KV7 1748 aa2.51□□□□□ -2.01
PTCD3-214ENST00000483925 MYH10P35580 1976 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 ANKRD31Q8N7Z5 1873 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
PTCD3-214ENST00000483925 PNMA8CA0A1B0GUJ8 204 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 FAM236AA0A1B0GUQ0 79 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 FAM236BA0A1B0GV22 79 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 BBIP1A8MTZ0 92 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 M0R233 179 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 MIFP14174 115 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 LINC00315P59091 139 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 SNRPD3P62318 126 aaKnown RBP2.5□□□□□ -2.01
PTCD3-214ENST00000483925 OCIAD2Q56VL3 154 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 PRR9Q5T870 116 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 Q8IYB0 196 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 TCTEX1D1Q8N7M0 179 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 CCL4L1Q8NHW4 92 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 HYLS1Q96M11 299 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 KDM5BQ9UGL1 1544 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 MYH11P35749 1972 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 NALCNQ8IZF0 1738 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 ARHGAP31Q2M1Z3 1444 aa2.5□□□□□ -2.01
PTCD3-214ENST00000483925 TRAV3A0A0B4J244 114 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 hDV103S1A0JD37 113 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 IGLV6-57P01721 117 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 TRACP01848 142 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 RBP4P02753 201 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 FGF7P21781 194 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 ZNF93P35789 620 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-214ENST00000483925 ROMO1P60602 79 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 PCBD1P61457 104 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 Q6ZTI0 123 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 OR2T35Q8NGX2 323 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 CLEC2BQ92478 149 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 SLC50A1Q9BRV3 221 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 PSMG3Q9BT73 122 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-214ENST00000483925 SLC35B3Q9H1N7 401 aa2.49□□□□□ -2.01
PTCD3-214ENST00000483925 SAR1AQ9NR31 198 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms