RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 E7EUB6 86 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 LYNX1G3V0Z9 82 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 LYNX1P0DP58 116 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 HIST1H1BP16401 226 aaKnown RBP6.05□□□□□ -1.44
SNX13-208ENST00000482558 CRYBB3P26998 211 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 EBI3Q14213 229 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 MMDQ15546 238 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 CENPWQ5EE01 88 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 C19orf35Q6ZS72 473 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 LYPD1Q8N2G4 141 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 IGFBPL1Q8WX77 278 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 PACRGQ96M98 296 aaPredicted RBP6.05□□□□□ -1.44
SNX13-208ENST00000482558 RASL11BQ9BPW5 248 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 DERL1Q9BUN8 251 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 GNB1LQ9BYB4 327 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 NIT2Q9NQR4 276 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 HIGD1AQ9Y241 93 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 PKDREJQ9NTG1 2253 aa6.05□□□□□ -1.44
SNX13-208ENST00000482558 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 IGHV3-72A0A0B4J1Y9 119 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 TRBV6-1A0A0K0K1D8 114 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 I3L2K1 104 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 PEX7O00628 323 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 SIVA1O15304 175 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 NUDT3O95989 172 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 SOD3P08294 240 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 NBEAP1P0C6P0 100 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 FAM106CPP0CH98 169 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 HIST1H1EP10412 219 aaKnown RBP6.04□□□□□ -1.44
SNX13-208ENST00000482558 GATA2P23769 480 aaPredicted RBP6.04□□□□□ -1.44
SNX13-208ENST00000482558 BRS3P32247 399 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 UBE2E1P51965 193 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 UBE2G1P62253 170 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 ARF6P62330 175 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 TMEM183BQ1AE95 376 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 C5orf64Q2M2E5 130 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 PAPPA-AS1Q5QFB9 102 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 PIK3CD-AS1Q5SR53 167 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 C10orf55Q5SWW7 151 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 HCP5Q6MZN7 132 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 PATE2Q6UY27 113 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 ZNF329Q86UD4 541 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 C5orf17Q8NAS9 161 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 FXYD5Q96DB9 178 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 FMC1Q96HJ9 113 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 RITA1Q96K30 269 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 MCRIP2Q9BUT9 160 aaKnown RBP6.04□□□□□ -1.44
SNX13-208ENST00000482558 FBXL15Q9H469 300 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 KLF12Q9Y4X4 402 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 SOX21Q9Y651 276 aaPredicted RBP6.04□□□□□ -1.44
SNX13-208ENST00000482558 MGAQ8IWI9 3026 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 SPTBN2O15020 2390 aa6.04□□□□□ -1.44
SNX13-208ENST00000482558 K7EN84 100 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 TOMM40O96008 361 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 HLA-DQA1P01909 254 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 IGLC1P0CG04 106 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 RD3LP0DJH9 198 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 ORM2P19652 201 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 GNLYP22749 145 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 MYCNOSP40205 109 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 RANP62826 216 aaKnown RBP6.03□□□□□ -1.44
SNX13-208ENST00000482558 PAFAH1B2P68402 229 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 FXYD3Q14802 87 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 IBA57Q5T440 356 aaKnown RBP6.03□□□□□ -1.44
SNX13-208ENST00000482558 CYB5R2Q6BCY4 276 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 VMO1Q7Z5L0 202 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 BAGE2Q86Y30 109 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 BPIFA4PQ86YQ2 179 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 TTC9CQ8N5M4 171 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 OR10D4PQ8NGN7 298 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 OR1B1Q8NGR6 318 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 PHLDA1Q8WV24 401 aaPredicted RBP6.03□□□□□ -1.44
SNX13-208ENST00000482558 IGF2BP2-AS1Q96M15 143 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 OTORQ9NRC9 128 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 NAGKQ9UJ70 344 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 EPDR1Q9UM22 224 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 V9GYV3 84 aa6.03□□□□□ -1.44
SNX13-208ENST00000482558 IGHV2-70DA0A0C4DH43 119 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 A0A1B0GW15 77 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 A0A1W2PRD5 423 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 FAM231BA6NCW3 169 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 GAGE12JA6NER3 117 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 SLC25A5P05141 298 aaKnown RBP6.02□□□□□ -1.45
SNX13-208ENST00000482558 REG1AP05451 166 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 FABP4P15090 132 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 PMCHP20382 165 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 MFAP2P55001 183 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 Q0VG73 95 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 PDE6HQ13956 83 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 HES1Q14469 280 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 KLK9Q2XQG4 91 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 FAM162BQ5T6X4 162 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 ATP5L2Q7Z4Y8 100 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 Q8N6K4 173 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 OR4F17Q8NGA8 305 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 ITLN2Q8WWU7 325 aaPredicted RBP6.02□□□□□ -1.45
SNX13-208ENST00000482558 ARPC1AQ92747 370 aa6.02□□□□□ -1.45
SNX13-208ENST00000482558 GPR82Q96P67 336 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms