RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 L7N2F9 121 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 M0R2Z0 102 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 AGPAT2O15120 278 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 CCNKO75909 580 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 VAMP2P63027 116 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 SLC38A11Q08AI6 406 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 RAB31Q13636 194 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 LINC00299Q6ZSB3 139 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 LINC00305Q7Z4B0 112 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 UBE2DNLQ8IWF7 75 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 CCDC32Q9BV29 185 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 ZNF331Q9NQX6 463 aaPredicted RBP8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 PPP1R14DQ9NXH3 145 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 GSKIPQ9P0R6 139 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 FAT2Q9NYQ8 4349 aa8.61□□□□□ -1.03
SQSTM1-207ENST00000481335 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 TCRBP04435 133 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 CDKN1BP46527 198 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 TAS2R60P59551 318 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 HIST1H1AQ02539 215 aaPredicted RBP8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 PATE2Q6UY27 113 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 ZNF431Q8TF32 576 aaPredicted RBP8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 DNAH2Q9P225 4427 aa8.6□□□□□ -1.03
SQSTM1-207ENST00000481335 PKHD1P08F94 4074 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 PLA2G10O15496 165 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 COX7A2P2O60397 106 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 RHOBP62745 196 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 GUK1Q16774 197 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 ZNF493Q6ZR52 646 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 Q6ZRG5 221 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 BAP18Q8IXM2 172 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 RPUSD4Q96CM3 377 aaKnown RBP8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 PFDN5Q99471 154 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 MGST2Q99735 147 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 PXMP4Q9Y6I8 212 aa8.59□□□□□ -1.03
SQSTM1-207ENST00000481335 H7BYZ3 331 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 ZNF253O75346 499 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 HTN3P15516 51 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 CAMLGP49069 296 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 ARL16Q0P5N6 197 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 VWC2Q2TAL6 325 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 SOHLH1Q5JUK2 328 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 C10orf113Q5VZT2 155 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 TMEM88Q6PEY1 159 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 OR1L4Q8NGR5 311 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 TMEM263Q8WUH6 116 aaKnown RBP8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 CHAC2Q8WUX2 184 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 NUDT15Q9NV35 164 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
SQSTM1-207ENST00000481335 HERC2O95714 4834 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 TRAV12-2A0A075B6T6 113 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 PLAC8L1A1L4L8 177 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 C5orf51A6NDU8 294 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 ZNF705GA8MUZ8 300 aaPredicted RBP8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 ATP5G1P05496 136 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 IGLC2P0DOY2 106 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 S100A11P31949 105 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 ATP5G3P48201 142 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 BCAP31P51572 246 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 CAV2P51636 162 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 HBG1P69891 147 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 HBG2P69892 147 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 Q6ZR54 194 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 STX12Q86Y82 276 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 C12orf45Q8N5I9 185 aaPredicted RBP8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 OR10J6PQ8NGY7 276 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 TMEM37Q8WXS4 190 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 ODF3Q96PU9 254 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 LINC01587Q99440 93 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 C11orf1Q9H5F2 150 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 DNAJC4Q9NNZ3 241 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 LYRM2Q9NU23 88 aaPredicted RBP8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 UQCC1Q9NVA1 299 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 WDR83OSQ9Y284 106 aa8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 LSM5Q9Y4Y9 91 aaKnown RBP8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 TIMM8BQ9Y5J9 83 aaPredicted RBP8.57□□□□□ -1.04
SQSTM1-207ENST00000481335 TRAV6A0A075B6T7 132 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 CBY3A6NI87 242 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 FAM25EA8MYX2 175 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 CCSO14618 274 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 MPDU1O75352 247 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 RPL29P47914 159 aaKnown RBP8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 SULT1A1P50225 295 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 OPCMLQ14982 345 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 NRARPQ7Z6K4 114 aa8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 RNASE8Q8TDE3 154 aaKnown RBP8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
SQSTM1-207ENST00000481335 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 RTL8CO15255 209 aa8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 PDE6HQ13956 83 aa8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 ATP6V1FQ16864 119 aa8.55□□□□□ -1.04
SQSTM1-207ENST00000481335 MZT2BQ6NZ67 158 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms