RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ZNF738Q8NE65 137 aa12.25□□□□□ -0.45
HSPG2-209ENST00000480900 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
HSPG2-209ENST00000480900 TMEM189A5PLL7 270 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 SIX6O95475 246 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 CNN1P51911 297 aaKnown RBP12.24□□□□□ -0.45
HSPG2-209ENST00000480900 TCTAP57738 103 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 CYCSP99999 105 aaKnown RBP12.24□□□□□ -0.45
HSPG2-209ENST00000480900 MIC13Q5XKP0 118 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 LCN15Q6UWW0 184 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 BPIFA4PQ86YQ2 179 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 LRRC20Q8TCA0 184 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 C2CD4CQ8TF44 421 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 CHAC2Q8WUX2 184 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 DNAJC4Q9NNZ3 241 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 GOLT1BQ9Y3E0 138 aa12.24□□□□□ -0.45
HSPG2-209ENST00000480900 AMBPP02760 352 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 RLN2P04090 185 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 RPL29P47914 159 aaKnown RBP12.23□□□□□ -0.45
HSPG2-209ENST00000480900 BAXQ07812 192 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 OPCMLQ14982 345 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 PSG3Q16557 428 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 OR11H7Q8NGC8 314 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 OR1L4Q8NGR5 311 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 PFDN5Q99471 154 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 SLC50A1Q9BRV3 221 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 RFNGQ9Y644 331 aa12.23□□□□□ -0.45
HSPG2-209ENST00000480900 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 E5RGE8 158 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 MPDU1O75352 247 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 FGF7P21781 194 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 B2MP61769 119 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 MORN5Q5VZ52 161 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 Q6ZTC4 211 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 C1orf158Q8N1D5 194 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 SLC25A31Q9H0C2 315 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 SLC39A9Q9NUM3 307 aa12.22□□□□□ -0.45
HSPG2-209ENST00000480900 LGALS9CQ6DKI2 356 aa12.21□□□□□ -0.45
HSPG2-209ENST00000480900 OR8A1Q8NGG7 326 aa12.21□□□□□ -0.45
HSPG2-209ENST00000480900 ZNF331Q9NQX6 463 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-209ENST00000480900 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.46
HSPG2-209ENST00000480900 HBE1P02100 147 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 H2BFSP57053 126 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 HIST1H1AQ02539 215 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-209ENST00000480900 NHLH2Q02577 135 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 SPINK13Q1W4C9 94 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 LRRC37A5PQ49AS3 106 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 RPUSD4Q96CM3 377 aaKnown RBP12.2□□□□□ -0.46
HSPG2-209ENST00000480900 OR5AC2Q9NZP5 309 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 PXMP4Q9Y6I8 212 aa12.2□□□□□ -0.46
HSPG2-209ENST00000480900 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 IGLL5B9A064 214 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 H0YIZ8 118 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 BOLA2-SMG1P6H3BVE0 249 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 M0R2Z0 102 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 SSNA1O43805 119 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 INSP01308 110 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 SPART-AS1P0CW21 52 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 NPCDR1Q9BY65 106 aa12.19□□□□□ -0.46
HSPG2-209ENST00000480900 SLC17A3O00476 420 aa12.18□□□□□ -0.46
HSPG2-209ENST00000480900 CRXO43186 299 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-209ENST00000480900 EMP1P54849 157 aa12.18□□□□□ -0.46
HSPG2-209ENST00000480900 GUK1Q16774 197 aa12.18□□□□□ -0.46
HSPG2-209ENST00000480900 RRN3P1Q2M238 152 aa12.18□□□□□ -0.46
HSPG2-209ENST00000480900 PPP1R1CQ8WVI7 109 aa12.18□□□□□ -0.46
HSPG2-209ENST00000480900 TMEM208Q9BTX3 173 aa12.18□□□□□ -0.46
HSPG2-209ENST00000480900 TRAV5A0A0B4J249 113 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 LOC102723971A0A1B0GUV8 181 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 H3BQ15 152 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
HSPG2-209ENST00000480900 PET100P0DJ07 73 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 RHOBP62745 196 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 ZNF767PQ75MW2 155 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 THAP6Q8TBB0 222 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
HSPG2-209ENST00000480900 RNF126Q9BV68 326 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 PPP1R14DQ9NXH3 145 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 APLNQ9ULZ1 77 aa12.17□□□□□ -0.46
HSPG2-209ENST00000480900 DEFB131BA0A096LNP1 70 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 H3BTX0 84 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 ZNF253O75346 499 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 CLINT1Q14677 625 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 FAM222AQ5U5X8 452 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
HSPG2-209ENST00000480900 IGHV4-4A0A075B6R2 117 aa12.15□□□□□ -0.46
HSPG2-209ENST00000480900 MPC2O95563 127 aa12.15□□□□□ -0.46
HSPG2-209ENST00000480900 TMEM256Q8N2U0 113 aa12.15□□□□□ -0.46
HSPG2-209ENST00000480900 ZNF586Q9NXT0 402 aa12.15□□□□□ -0.46
HSPG2-209ENST00000480900 YTHDF2Q9Y5A9 579 aaKnown RBP12.15□□□□□ -0.46
HSPG2-209ENST00000480900 TRAV12-2A0A075B6T6 113 aa12.14□□□□□ -0.47
HSPG2-209ENST00000480900 TSPOP30536 169 aa12.14□□□□□ -0.47
HSPG2-209ENST00000480900 OXA1LQ15070 435 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms