RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 LRRC20Q8TCA0 184 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 SMIM8Q96KF7 97 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 DNAH2Q9P225 4427 aa10.82□□□□□ -0.68
LIMS3-203ENST00000480744 FAT2Q9NYQ8 4349 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 TRAV12-2A0A075B6T6 113 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 FAM25EA8MYX2 175 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 PRB4P10163 310 aaPredicted RBP10.81□□□□□ -0.68
LIMS3-203ENST00000480744 SELENOTP62341 195 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 RHOBP62745 196 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 DLK1P80370 383 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 IL15RAQ13261 267 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 ARL6Q9H0F7 186 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 C11orf1Q9H5F2 150 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 PPP1R14DQ9NXH3 145 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 MGAT4CQ9UBM8 478 aa10.81□□□□□ -0.68
LIMS3-203ENST00000480744 A0A1B0GVY2 172 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 C5orf51A6NDU8 294 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 RTL8CO15255 209 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 CRXO43186 299 aaPredicted RBP10.8□□□□□ -0.68
LIMS3-203ENST00000480744 PRAF2O60831 178 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 SIX6O95475 246 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 SLC38A11Q08AI6 406 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 LGALS9BQ3B8N2 356 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 TMEM14EPQ6UXP3 125 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 S100A7AQ86SG5 101 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 OR10P1Q8NGE3 313 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 C2orf50Q96LR7 162 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 NPVFQ9HCQ7 196 aa10.8□□□□□ -0.68
LIMS3-203ENST00000480744 K7EPK0 472 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 GOSR2O14653 212 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 PTTG1O95997 202 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 CXCL3P19876 107 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 PLP1P60201 277 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 PSG3Q16557 428 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 OR8A1Q8NGG7 326 aa10.79□□□□□ -0.68
LIMS3-203ENST00000480744 GPN1Q9HCN4 374 aaPredicted RBP10.79□□□□□ -0.68
LIMS3-203ENST00000480744 A0A087X0K7 114 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 LYRM9A8MSI8 78 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 HTN1P15515 57 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 B2MP61769 119 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 RNF212Q495C1 297 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 TEPPQ6URK8 271 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 PATE2Q6UY27 113 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 LINC01587Q99440 93 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 ARV1Q9H2C2 271 aa10.78□□□□□ -0.68
LIMS3-203ENST00000480744 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
LIMS3-203ENST00000480744 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 TSC22D2O75157 780 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 SNRPCP09234 159 aaKnown RBP10.77□□□□□ -0.69
LIMS3-203ENST00000480744 AZU1P20160 251 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 H2BFSP57053 126 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 RAB32Q13637 225 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 ZNF546Q86UE3 836 aa10.77□□□□□ -0.69
LIMS3-203ENST00000480744 RPUSD4Q96CM3 377 aaKnown RBP10.77□□□□□ -0.69
LIMS3-203ENST00000480744 F5H768 121 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 L7N2F9 121 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 TSPOP30536 169 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 TAS2R30P59541 319 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 VAMP2P63027 116 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 FCN2Q15485 313 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 SOHLH1Q5JUK2 328 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 Q6ZR54 194 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 LINC00305Q7Z4B0 112 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 ATG101Q9BSB4 218 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 RNF24Q9Y225 148 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 ALG5Q9Y673 324 aa10.76□□□□□ -0.69
LIMS3-203ENST00000480744 PKHD1P08F94 4074 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 AGPAT2O15120 278 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 COX7A2P2O60397 106 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 S100A10P60903 97 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 PXDC1Q5TGL8 231 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 LCN15Q6UWW0 184 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 TMEM256Q8N2U0 113 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 PCLOQ9Y6V0 5065 aa10.75□□□□□ -0.69
LIMS3-203ENST00000480744 PLAC8L1A1L4L8 177 aa10.74□□□□□ -0.69
LIMS3-203ENST00000480744 H3BTX0 84 aa10.74□□□□□ -0.69
LIMS3-203ENST00000480744 MRPS12O15235 138 aaKnown RBP10.74□□□□□ -0.69
LIMS3-203ENST00000480744 NUDT3O95989 172 aa10.74□□□□□ -0.69
LIMS3-203ENST00000480744 BCAP31P51572 246 aa10.74□□□□□ -0.69
LIMS3-203ENST00000480744 TAS2R60P59551 318 aa10.74□□□□□ -0.69
LIMS3-203ENST00000480744 MGST2Q99735 147 aa10.74□□□□□ -0.69
LIMS3-203ENST00000480744 IGSF23A1L1A6 192 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 FAM24AA6NFZ4 105 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 H0YIZ8 118 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 SSNA1O43805 119 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 ATP5G1P05496 136 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 CXCL2P19875 107 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 CDKN1BP46527 198 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 ATP5G3P48201 142 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 C1orf134Q5TEV5 83 aa10.73□□□□□ -0.69
LIMS3-203ENST00000480744 C10orf113Q5VZT2 155 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms