RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 CSRP1P21291 193 aaKnown RBP3.43□□□□□ -1.86
SCN2A-205ENST00000480032 TRPT1Q86TN4 253 aaKnown RBP3.43□□□□□ -1.86
SCN2A-205ENST00000480032 PFN2P35080 140 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 MRPS21P82921 87 aaKnown RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 LYPD6Q86Y78 171 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 LINC00312Q9Y6C7 94 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 ZNF793Q6ZN11 406 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C15orf62A8K5M9 175 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 RPL27AP46776 148 aaKnown RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 ZNF474Q6S9Z5 364 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 FOXL2NBQ6ZUU3 175 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 GFRA3O60609 400 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 IGFBP2P18065 325 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 MP68P56378 58 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PTCRAQ6ISU1 281 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 RSPO2Q6UXX9 243 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 K7EM74 188 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 LTAP01374 205 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 NNATQ16517 81 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 CR1LQ2VPA4 569 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 LY6G5CQ5SRR4 150 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 MARCH3Q86UD3 253 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C1orf147Q96MC9 270 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C9orf85Q96MD7 179 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 CFHR2P36980 270 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PRR20EP86478 221 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PRR20CP86479 221 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PRR20DP86480 221 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PRR20BP86481 221 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PRR20AP86496 221 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PIK3CD-AS1Q5SR53 167 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 SHISA2Q6UWI4 295 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 SLC25A29Q8N8R3 303 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 NTN5Q8WTR8 489 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 NPIPB3Q92617 1050 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 RASL10AQ92737 203 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 COL5A3P25940 1745 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 FER1L6Q2WGJ9 1857 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 NABP1Q96AH0 204 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PGLYRP4Q96LB8 373 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 FANCD2OSQ96PS1 177 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C1QTNF5Q9BXJ0 243 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 PKIGQ9Y2B9 76 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 LOC102723996A0A087X1L8 192 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 TRAV21A0A0B4J279 112 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 FGF6P10767 208 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C19orf54Q5BKX5 351 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 ZC2HC1AQ96GY0 325 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 CXXC4Q9H2H0 198 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 C6orf106Q9H6K1 298 aaPredicted RBP3.42□□□□□ -1.86
SCN2A-205ENST00000480032 DOCK5Q9H7D0 1870 aa3.42□□□□□ -1.86
SCN2A-205ENST00000480032 MNX1P50219 401 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 C2orf66Q6UXQ4 117 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 GTF3C1Q12789 2109 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 PRSS22Q9GZN4 317 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 NRXN2Q9P2S2 1712 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 SCO2A0A1W2PP80 73 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 J3QQQ9 107 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 IGHV1-69P01742 117 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 VEGFBP49765 207 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 FXYD7P58549 80 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 CCL4L1Q8NHW4 92 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 BADQ92934 168 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 VPREB3Q9UKI3 123 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 CNOT1A5YKK6 2376 aaKnown RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 GATA1P15976 413 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 TMEM155Q4W5P6 130 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 FHL5Q5TD97 284 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 ZFP2Q6ZN57 461 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 LINC00477Q96M19 166 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 MDKP21741 143 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 SAA1P0DJI8 122 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 CCL4P13236 92 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 ECSCRQ19T08 205 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 DEFB114Q30KQ6 69 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 FXYD5Q96DB9 178 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 SCARF2Q96GP6 870 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-205ENST00000480032 LHFPL6Q9Y693 200 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 DOCK6Q96HP0 2047 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 DOCK11Q5JSL3 2073 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 ADARB2-AS1A8MUL3 147 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 DEFB133Q30KQ1 61 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 C1orf158Q8N1D5 194 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 TMEM167AQ8TBQ9 72 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 HILPDAQ9Y5L2 63 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 ZGRF1Q86YA3 2104 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 D6R8Y8 96 aa3.41□□□□□ -1.86
SCN2A-205ENST00000480032 IGHV1-58A0A0C4DH39 117 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 UBE2D1P51668 147 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 A0A0A6YYD4 124 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 FOLR3P41439 243 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 KIAA1644Q3SXP7 199 aa3.4□□□□□ -1.86
SCN2A-205ENST00000480032 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms